Gene Rcas_2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2316 
Symbol 
ID5539797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2985019 
End bp2985786 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID640894449 
ProductArsR family transcriptional regulator 
Protein accessionYP_001432417 
Protein GI156742288 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase
[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.137023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTTG CTCATCAACA CCCTATCCCA CCCTCACCAA TGCCGGAGGC ATTGCGTCTG 
CTCGGCGACG AGACGCGCTG GCGGCTGATC GGCGAACTGC GCTGGAGCGA CCGGCAGGTC
GGCGAACTTT GTGAACGTCT CGATCTGCCA CAGAACCTGG TATCGTACCA TCTTGGCGTC
CTGCGTCAGG CGGGGCTGGT GCGCGCGCAC CGGAGCGATG CCGATGGACG GGTGCTCTAC
TATGCGCTCG ACCTTGCGGC GCTTCAACGA CAGATCCAAT CGATCAGCAG CGCTCTGGCG
CTTCCGACAC GCGCAGCGCC GCCGTCGTCC ATGGATGGTC CGGTGCTGTT CATTTGCACC
CGCAACAGCG CCCGCTCGCA GATCGCTGAA GCCTGGCTGC GCCACCTGAG CGGCGGTCGG
ATTATCACGC GCAGTGCAGG CACGGCGCCG GCCAGTGTGC AGCCGCTGGC AATTCAGGTC
ATGGCGGAAG CAGGCATCGA TATCGGCTAT CAGCGCGCCA AACGTATCGC CGATGTCATT
GAGCCGGCGC CGGCCGTGGT GGTGACAGTC TGCGATCTGG CGCGCGAAGA GTGTAGTGCA
ACGCTGGATG CGCCGTTGTG TCTGCACTGG AGCATCCCCG ATCCGGTCGC TGTGTCTGGC
AGTGAGTCCG AACGATTGGC GGCGTTCCGC GCGGCGCGCG ATGAGCTGCG GCTGCGCGTC
GAAGGATTGC TCGGCTTACT GCCAACGATT TCGATCAATC CAAACTGA
 
Protein sequence
MTLAHQHPIP PSPMPEALRL LGDETRWRLI GELRWSDRQV GELCERLDLP QNLVSYHLGV 
LRQAGLVRAH RSDADGRVLY YALDLAALQR QIQSISSALA LPTRAAPPSS MDGPVLFICT
RNSARSQIAE AWLRHLSGGR IITRSAGTAP ASVQPLAIQV MAEAGIDIGY QRAKRIADVI
EPAPAVVVTV CDLAREECSA TLDAPLCLHW SIPDPVAVSG SESERLAAFR AARDELRLRV
EGLLGLLPTI SINPN