| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2298 |
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| Symbol | |
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| ID | 5539779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2965130 |
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| End bp | 2965834 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894431 |
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| Product | ABC transporter related |
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| Protein accession | YP_001432399 |
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| Protein GI | 156742270 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.644067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.429574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACAGG TTGAGCATCT GAATGTCGCC TACGACACGC TTCAGGTGTT GTGGGACGTT
TCGCTGGAGG TGCGCGAAGG CGAGATTGTC GCCCTGATCG GCTCGAACGG CGCCGGCAAA
ACGACGCTGC TCAGAACGAT CTCGGGCTTG ATGAAGCCGT TGTTCGGTTC AATCCGCTTT
ATGGGCGAGG AGATCGCCGG TCTGCCGCCC CACGAGATAT GTCGGCGCGG GGTGATCCAG
GTTCCTGAAG GACGCGCCTT GTTCCCGCGG ATGCGAGTCC TCGAAAATCT AGAACTCGGC
GCCTACCTGC CGGCCGCGCG CGCGCAGCGC CACGAGACCA TCGAGTATGT CTACCATCTC
TTTCCCCGCT TGAAAGAACG CTGGCGACAG GACGCCGGAA CCCTCAGCGG CGGTGAGCAA
CAGATGGTCG CTATCGGGCG AGCGCTCATG GCGCGCCCGA AACTTCTGAT GCTCGATGAA
CCGTCGCTTG GTCTGGCGCC GGTGCTGGTC GAGACGATCA TGGAGGTTCT GACGCGCCTG
AATGCGGAAG GCATGACGAT CCTGCTTGTG TCGCAAGAGG TGCATCAGGC GCTCGCCATC
GCGCATCGCG CCTACGTGAT CGAAAATGGA CGGATTGTGC GCAGCGGATC ATCGCGCGAA
CTGCGCGATG ATGACGCTGT GCGCAGTGCA TATTTAGGGT TGTAA
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| Protein sequence | MLQVEHLNVA YDTLQVLWDV SLEVREGEIV ALIGSNGAGK TTLLRTISGL MKPLFGSIRF
MGEEIAGLPP HEICRRGVIQ VPEGRALFPR MRVLENLELG AYLPAARAQR HETIEYVYHL
FPRLKERWRQ DAGTLSGGEQ QMVAIGRALM ARPKLLMLDE PSLGLAPVLV ETIMEVLTRL
NAEGMTILLV SQEVHQALAI AHRAYVIENG RIVRSGSSRE LRDDDAVRSA YLGL
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