| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2284 |
|---|
| Symbol | |
|---|
| ID | 5539765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2946790 |
|---|
| End bp | 2947179 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640894417 |
|---|
| Product | glycine cleavage system H protein |
|---|
| Protein accession | YP_001432385 |
|---|
| Protein GI | 156742256 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
|---|
| TIGRFAM ID | [TIGR00527] glycine cleavage system H protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.868083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0000750772 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTCA AGACGCTAGC CGAATTGCAG TACAGCAAAA CACACGAGTG GATCCGAATC
GAAGGCGATG AAGCGACGGT CGGGATCACC GATTATGCGC AGGACGCGCT CGGTGATGTG
GTTTATGTCG ATCTGCCGGA AGTCGGCGCG CGCTTCGAGG CGGACGGCGT GTTCGGCGCG
GTCGAGTCGG TTAAGGCGGC ATCAGATTTG TATCTGCCGG TCGCCGGAGA GATCATCGCC
GTGAACGAGG CGCTGATGAA TACTCCTGAG TTGATCAACA AGGACCCGTA TGGCGAGGGG
TGGATCGTGA AGATCAGGGT CGCTCCTGGC GTTGGGGCGT TGATGAGCGC AGAAGCGTAT
GCTGCGTTTG TGGATTCGAT CAAGCATTGA
|
|---|
| Protein sequence | MTFKTLAELQ YSKTHEWIRI EGDEATVGIT DYAQDALGDV VYVDLPEVGA RFEADGVFGA
VESVKAASDL YLPVAGEIIA VNEALMNTPE LINKDPYGEG WIVKIRVAPG VGALMSAEAY
AAFVDSIKH
|
|---|
| |