| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2242 |
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| Symbol | |
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| ID | 5539723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2890287 |
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| End bp | 2892539 |
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| Gene Length | 2253 bp |
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| Protein Length | 750 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894375 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001432343 |
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| Protein GI | 156742214 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00781921 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAACTG AGAACCGGGA ACCAATGCAG ACACAGACAC GCGATCACAT CTTCACTGTT
CACGGCATCG ACTGTGCGCA TTGTGCGAAC ACTATCGAGG TGAGCCTGGT TCGTCTCGAT
GGCGTCGAGG TGTGTGAACT GAATGCCACG ACAGGACGGC TGCGCGTGCG CGGCGCTGTC
GAACCTGATA CAGTTATCGC GTATGTGCGT TCGTTGGGGT ATGAAGCGAC GCCGACTGAC
GAGACCGGTG CAACTTCGCC TTCTTCGGAC GCGCCAGTGT CGTTTGTCCG ATTTATGTGG
CAGCGTGTCG AGACGCGCCT GGCATTGGTC GGCGCCGTGC TGATCGTTCC AGGTGTGGTG
TTGCACGAAC TCCTTGGCTG GCGCACTCTT TGGATCGACG CGCTGGCATG GGCTGCCCTG
GTCGCTGCCG GGTTGCCGAT TGCGCGCAGC GCCTGGCGAT CACTGGTCGT CAGCCGAACT
ATCTCGATCA ATGCTCTGAT GACTATTGCA GCGGTCGGCG CCGTCATTAT CGGCGCGCAC
GTCGAGGCAG GGCTGGTGAT GGTGTTGTTT GCGATTGGCG AGGCGATTGA AGGGTTTACG
GCAGCGCGCG CGCGGGACGC CATTCGTTCG CTCATGACCC TCGCGCCCGA AACGGCGCTG
CGTCTGCGCG ATGGATACGA GACGCGCGTG CCGGTTGCCG AACTGGAAGT CGGAGATGTG
ATCATTGTGC GCCCTGGTGA GCGTGTGCCG ATGGATGGCG TGGTGCGCAG CGGCGCAACC
CACGTCGATC AGGCGCCGAT CACCGGTGAG AGCGTGCCGG TTGTCAAAAC GCCGGGGGCA
CACGTGTATG CCGGGAGCAT CAATGGCGAA GGTGTGATGG AGGTGGTCGT CACGCATCCG
GCGAGTGAGA ATACGATCAG TCGGATGATC CGCCTGGTGC AGGAGGCGCA GGACCGTCGC
GCGCCGGTGC AGCGTATGAT CGACCGCTTT GCAGGCTGGT ATACGCCTGC GGTGGTTGGC
ATTGCTGCGC TGATGGCGAC TGTGCCGCCA TTACTGTTCG GGCAGCCGTT CTGGAACCCG
TCGCCGGACG AAACCGGGTG GTTCTACCGC AGCCTGGCGT TGCTGGTTGT CGCCTGCCCC
TGTGCGTTGG TGATCAGCAC GCCGGTCAGC GTGGTCAGTG CGTTGAGCGC CGCCGCGCGC
GCCGGTGTGC TGATCAAAGG CGGCGCGGCG CTCGAGGCGC TTGGTGGTAT ACGCGCGGTT
GCGTTCGATA AAACGGGCAC CCTGACGACC GGCAAGCCGA CGCTTGTGAT GGTGCGTTCG
GTCGATTGCC GCGAACCGGA ACAGAACAAT GACGCGCGGT GTGACGCATG CGATACGCTG
CTCGAACTCG CCTGTGCCGT TGAGCGGCGC TCGGAACATC CGCTGGCGCA CGCCATTGTT
GATGCAGCGC GTAGGCGAGG TCTCAGCCAG ACCGTGCCGC CTGCCGCGTC GGTCGCTGCT
CTGCCAGGGC ACGGTATTAT CGGCGAGGTT GAAGGGCGCA CAGTGGTGAT CGGCAGCCAC
CGCTATTTCG ATGAAACATC ACCCCACCCA CGTTCCTTTT GCAACCGCGC AGAACAGGAT
GCCAGCGTCG GCAGGACGCC GCTGATGATC AGCGTCGATG GGGTTTTCGC CGGTATGTTG
AGCGTCGCCG ATACAGTGCG CCCCGAAAGC CGTGAGGCGG TGGCTCTACT CCGTGAGGCG
GGGATCGAGC ATATCATTAT GCTGACCGGT GACCGCCGTG AGACGGCATA TGCCGTCGCT
GCCGACGTCG GTGTCGATGA TGTGCGCGCT GAAGTGCTTC CTGCTCACAA AGCGGAGACG
GTTGAGAATC TCCGCGCTGC CTATGGCGCT GTGGCGATGG TCGGCGATGG CATCAACGAC
ACGCCTGCCC TGGCATCGGC GACGGTCGGA ATTGCTATCG GTGCAGCGCA CGGCGGCGCG
AATCAGGCGA TGGAGACCGC CGATGTGACG TTGATGAGCA ACGATCTTCG TCGCCTGCCG
TTCGTGTTCG CGCTGGCGCG CGCCGCGCGA CGAACCATTA TGCTCAATGT TGCATTCAGC
ATCGCCGTGA AAGTGGTGTT TCTGGCGATT GTCGCAGCAG GATGGAGCAC CATGTGGATG
GCGGTGTTCG CCGATATGGG AACGTCGCTG CTCGTGACGT TGAACGGTCT CCGGTTGCTT
GGCTTCCGTC CCAAAACAGA AGCGTTTTCC TGA
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| Protein sequence | MRTENREPMQ TQTRDHIFTV HGIDCAHCAN TIEVSLVRLD GVEVCELNAT TGRLRVRGAV
EPDTVIAYVR SLGYEATPTD ETGATSPSSD APVSFVRFMW QRVETRLALV GAVLIVPGVV
LHELLGWRTL WIDALAWAAL VAAGLPIARS AWRSLVVSRT ISINALMTIA AVGAVIIGAH
VEAGLVMVLF AIGEAIEGFT AARARDAIRS LMTLAPETAL RLRDGYETRV PVAELEVGDV
IIVRPGERVP MDGVVRSGAT HVDQAPITGE SVPVVKTPGA HVYAGSINGE GVMEVVVTHP
ASENTISRMI RLVQEAQDRR APVQRMIDRF AGWYTPAVVG IAALMATVPP LLFGQPFWNP
SPDETGWFYR SLALLVVACP CALVISTPVS VVSALSAAAR AGVLIKGGAA LEALGGIRAV
AFDKTGTLTT GKPTLVMVRS VDCREPEQNN DARCDACDTL LELACAVERR SEHPLAHAIV
DAARRRGLSQ TVPPAASVAA LPGHGIIGEV EGRTVVIGSH RYFDETSPHP RSFCNRAEQD
ASVGRTPLMI SVDGVFAGML SVADTVRPES REAVALLREA GIEHIIMLTG DRRETAYAVA
ADVGVDDVRA EVLPAHKAET VENLRAAYGA VAMVGDGIND TPALASATVG IAIGAAHGGA
NQAMETADVT LMSNDLRRLP FVFALARAAR RTIMLNVAFS IAVKVVFLAI VAAGWSTMWM
AVFADMGTSL LVTLNGLRLL GFRPKTEAFS
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