| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2237 |
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| Symbol | |
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| ID | 5539718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2884591 |
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| End bp | 2885271 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640894370 |
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| Product | restriction endonuclease EcoRV |
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| Protein accession | YP_001432338 |
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| Protein GI | 156742209 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000657606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000585115 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATAAAA ACAATTTTTT GGATGCGCTT CAGAAAGAAG TAGATACGTT TAATTCGGCG
TTTTCCACTC CAAATGGTGA CTGGATTATC AAGGGGTTTA TTGACATAGC CAAGAACATT
TACACCATTT CGGCAGACAC AAAAGTTATC TCAAAAATCA TGGAACTTTT GTTGTTCCCA
GAGCTTGCGC ACTTCGCAGA AAAGCATGGC TTGAAAATGG TCTTATCGGA ACAGCAGAAC
TTTTATCCAG ACATAAGTTT TGTAGATGAT GATGGTCACC GTTTTGCACT TGACTTGAAG
AGTACTTACA GAGTTGATAG TAGCCGCGTG AATGGTATGA CACTCGGGGC TTTTACTGGA
TACTTCCGAG AAAGGAATAG CACAAAGAAC ATAACTTTTC CCTACGTTTC TTATAGCGGA
CACTTTGTTC TGGGTGTGAT TTATTCAAAG ACTGATGACT TGATTGACGA GCGAAGAAGA
TACACTCTCG ATGAACTTGA GCGGATTACA TCTGTCATCA GAGACTTTCA GTTCTTTGCT
CAAGAAAAAT ATCGCATTGC GTCTGACCGT CCAGGGAGTG GCAATACCAA GAATATTGGT
TCAGTCACAG AGATTGATAC GCTTGTAAAT GGATCTGGCT CGTTTGCTTC GTTAGGAGAA
GATGTTTTTG ATGACTACTG A
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| Protein sequence | MDKNNFLDAL QKEVDTFNSA FSTPNGDWII KGFIDIAKNI YTISADTKVI SKIMELLLFP
ELAHFAEKHG LKMVLSEQQN FYPDISFVDD DGHRFALDLK STYRVDSSRV NGMTLGAFTG
YFRERNSTKN ITFPYVSYSG HFVLGVIYSK TDDLIDERRR YTLDELERIT SVIRDFQFFA
QEKYRIASDR PGSGNTKNIG SVTEIDTLVN GSGSFASLGE DVFDDY
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