| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2236 |
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| Symbol | |
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| ID | 5539717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2883548 |
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| End bp | 2884492 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640894369 |
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| Product | DNA adenine methylase |
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| Protein accession | YP_001432337 |
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| Protein GI | 156742208 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0338] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00571] DNA adenine methylase (dam) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00406547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000680943 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGATTGTTC TTCAAGGTTT ACCGCGCACA GTAAAGCAAG TAATTGTCCC CCCGATAAAG
TGTCAGGGGA TTAAAACGAA GCTCGTCAAA TTCATCTTGA GCAATGTCTC CTGGAATGGC
AAAGGGCGAT GGATAGAACC GTTTCTTGGG TCAGGTGTCG TTTTGTTCAA TGTGCAACCA
GAACGTGCAT TAGTCAATGA TATCAATCCC CACATTATCA GGCTGTATCA GATGATTTAT
GATGGGAGTT TGTCGCCAGA AGAAGTAAGA ACGTATTTAA CAGCAGAAGG CAAAAAATTG
CTCGTCAGTG GCGAAGATTA CTATTACGCA GTAAGAGAAC GCTTCAACAA GAGCGGAGAT
CCATTAGACT TCATTTTCCT CAACAGATCA TGTTTTAACG GGATAATGCG CTTTAATAGT
AAGGGGGAGT TTAATGTTCC GTTTTGTCGT AAACCAGACC GCTTTCGTCA GTCCTATGCG
ACTAAGATAG TTAATCAGAT TTCACAGATA CGTAAAATCA TGCAGAGTAA AGATTGGGAG
TTTTGTGTTG GAGATTGGCG ACACATTCTT GAGAATGTCA CAGAAGACGA TTTTGTCTAT
CTTGACCCGC CTTACATCGG CAGACATACA GATTATTATC AGCAATGGTC GGAAGATAAC
GCGTCTGATT TGGCGATAAT TGCTCGGAAT TTGCCGTGTG GTTTTGCGTT GTCTATGTGG
AAAGAAAACA AATATCGCCT AAATCCACAT ATTGCTTACT ATTGGGATGG ATTAATCGAG
AGAACCTTCA CTCATTTTTA TCATGTAGGT TCGACCGAAG ATCTCAGAAA TTCAATGGAA
GAAGCTTTGT TGATAAAACC TGGCCACGAA GCAGGGAAAG TTGAAACTAC GAAAGCTGCC
AAGCCTGTCC AATTGGCGTT TGCTTTGCAT GAACAGGCAG GCTAA
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| Protein sequence | MIVLQGLPRT VKQVIVPPIK CQGIKTKLVK FILSNVSWNG KGRWIEPFLG SGVVLFNVQP
ERALVNDINP HIIRLYQMIY DGSLSPEEVR TYLTAEGKKL LVSGEDYYYA VRERFNKSGD
PLDFIFLNRS CFNGIMRFNS KGEFNVPFCR KPDRFRQSYA TKIVNQISQI RKIMQSKDWE
FCVGDWRHIL ENVTEDDFVY LDPPYIGRHT DYYQQWSEDN ASDLAIIARN LPCGFALSMW
KENKYRLNPH IAYYWDGLIE RTFTHFYHVG STEDLRNSME EALLIKPGHE AGKVETTKAA
KPVQLAFALH EQAG
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