Gene Rcas_2233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2233 
Symbol 
ID5539714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2881205 
End bp2881765 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content51% 
IMG OID640894366 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001432334 
Protein GI156742205 
COG category[R] General function prediction only 
COG ID[COG4552] Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0339502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000606911 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAGTAT CAATCGGTAT CTTGAGTGAT AACCGGCTAA CTATCCAAGG AGTTCAAGGC 
GCATGCTTGT CAGAGACAGA TCGGAAAACC ATCATCGCAC TCTGCAACCG CGCTTACGAA
GACGACTTAG AACCACTGTT CAACACGTTT GTTGGCGCAA CGCATGTTCT TGGATACCAC
AATGGCCTTC TCGTCAGCCA TGCGCTCTGG GTGACCCGCT ATTTGCAAGT CGGAAGTGGT
CCTCTCTTGC GCACAGCGTA CATCGAAGCG GTTGCTACCG ACCCCGCCTA CCGCAAGCGA
GGTTTTGCAA CAACCATCAT GAAACGCATT GCGGATGAGA TTGGAGACTA TGAATTGGCC
GCACTTTCTC CATCCAGTGT CGCGTTTTAT GAGCGACTTG GGTGGGAGCT TTGGCGTGGT
CCGTTGTTTA TCAGAACCGA AACTGACTTG TTGCCATCTC CTGCTGAAGA ACAGGTGATG
ATTCTACGTC TTCCGAAAAC ACCGCCGCTC GATCCAAATG CACCACTTTC CGTAGAGTGG
CGTGAAGGTG AATTGTGGTG A
 
Protein sequence
MQVSIGILSD NRLTIQGVQG ACLSETDRKT IIALCNRAYE DDLEPLFNTF VGATHVLGYH 
NGLLVSHALW VTRYLQVGSG PLLRTAYIEA VATDPAYRKR GFATTIMKRI ADEIGDYELA
ALSPSSVAFY ERLGWELWRG PLFIRTETDL LPSPAEEQVM ILRLPKTPPL DPNAPLSVEW
REGELW