Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2226 |
Symbol | |
ID | 5539707 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2873088 |
End bp | 2875601 |
Gene Length | 2514 bp |
Protein Length | 837 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640894359 |
Product | putative uncharacterized restriction enzyme |
Protein accession | YP_001432327 |
Protein GI | 156742198 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000214566 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000161131 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAGTAACT TCTTCCCCCC GCGCCCCAAG GTCGAGCCGA AAATCTACGC CTACAAGGAC ACCAACCCCG AATACGAGGG CTTGCTCAAG ATCGGCTACA CCACCAAGAG CGTGCAGGAG CGGGTGGCGC AGCAGTATCC CACCCTGCGG CCCGGCGGCA AGCTGCCGTA TTGCATCGTG CTGGAAGAGC CGGCTATCCG CAACGATGGC ACAGTCTTCA CCGATCGCGA CGTGCACCGC ATGCTGCGCA TCAACGGCAT CCGCAACGAG GGCGGCGAAT GGTTCCGCTG CACCGTCGAA CAGGTCAGGG CGGCGATTAA TGCCGTGCGA GCTGGGCAAC TCTTGGAAGA GCAGCGCTCC CTCAACTTCA CGATGCGGCC AGAGCAGGAG GCAGCGGTGG CAAAGACCAT GGCCTACTTC CAAAGCTACC GCCGGGAAAA CGGCAAGCCG CCGCATTTCC TCTGGAACTG CAAGATGCGC TTCGGCAAGA CCTTCGCCGC CTATCAACTG GCCAAACGCA TGGGCTGGAA AAAGGTTCTC GTGCTGACCT TCAAGCCAGC GGTGCAGAGC GCCTGGGAAG AGGATTTGCG CTGCCACGTG GATTTTCAGG GCTGGCAGTT CATCAAGCCC GGCGGGCTGA CCTACGAGCA GGCAGATAAA AACAAGCCTA TCGTCTGCTT TGGCTCGTTT CAGGACTATC TCGGCCGCAA TCCGAAGACG GGCGGCATCA AAGCCAAGAA CGAATGGGTG CATGCCACCC ACTGGCACTG CGTCATCTTT GATGAATACC ACTTCGGCGC TTGGCGCGAG AAGGCCAAAG ACCTGTTTGA GGGCGAGGAT GAAGCGGAAC GGAAAGCCTC GGAAGGGGAA GCCATTGATT ACTTCGATGA GGATATCCTG CCCATCACCT CCGATCACTA CCTGTACCTT TCCGGCACAC CGTTCCGGGC CATTGCCACC GGCGAGTTCA TCGAAGAGCA AATTTACAAC TGGACATATT CTGATGAACA GAAGGCAAAA GAGGAGTGGG ACGACAGCAA CGGCCCCAAC CCCTATGCCG CATTGCCGCG CATGGTGCTG ATGACCTATC AACTGCCAGA CGCCATTCGC GAAGTGGCGA TGCAGGGAGA GTTCAACGAG TTCGATCTGA ACGTGTTCTT TTCGGCCGAG GGCGTGGGCG ACAAGGCGCG GTTCAAATAC GAAGACGAGG TGCAGAAGTG GTTGGACCTC ATCCGTGGGG CATACCTGCC TACAAACCTG GATAACCTCC GTTTGGGAGC GCAGAAGCCG CCGCTCCCCT ACTCGGATGT GCGGCTGCTG AATGTGCTCA CCCATACGGT CTGGTTTTTG CCCAGCGTGG CCGCCTGCTA CGCCATGCGC AATCTCTTAG CCAAACCACA CAACAAGTTC TATCACGATT ACAAGGCCAT CGTGGCTGCC GGCGCCGCTG CGGGCATCGG CGTCAATGCC CTCCCGCCGG TGCTGGACGC CATGGGCGAT CCGCTCAAGA CGAAAACCAT CACCCTCACC TGCGGCAAAC TGACCACCGG CGTCACGGTT CGGCCCTGGA CGGGCATCTT CATGCTGCGC AACACATCTA GCCCAGAAAC CTACTTCCAG GCCGCCTTCC GCGTGCAGAG TCCATGGACG ATTCAGAATC CTGACGGAAC CTCACCCAAC GCGGAGCTGA TTCTCAAAGA AGAGTGCTAT GTGTTCGATT TTGCGCCGGA TCGCGCCCTG CGGCAGATTG CCGACTACAG TTGCCGCCTG AATGTGAATG AGGATGACCC GGAAAAGAAA GTGGAGGAAT TTATCCACTT CCTGCCGGTG CTGGCGTATG ATGGGAGTTC AATGCGACAG ATTGATGCCG CCGGCGTGCT GGAAATGGCC ATGAGCGGCA CCACCGCCAC CCTGCTGGCC CGCCGCTGGG AAAGCGCGCT ATTGGTGAAT GTGGACAATG ACACTCTGCG GCGGCTGATA ACCAACGAAC AGGCGATGCA GGCGCTGATG AACATTGAGG GCTTCCGCAA CCTCAATCAG GAGATTGAAA CCATCATCAA CAAGTCGGAG GCCGTGAAAC GGCTGAAAAA AGAGGCCAAC GACCGAGCGC TTTCCGCTCA AGAAAAGCGT GAGCTGACCG AAGAGGAGAA GGAATTCAAG AGCAAGCGCA AACAGATTCA GGAAAAGCTC ATCAAGCTGG CGACGCGCAT CCCCATTTTT ATGTATTTGA CCGACCATCG GGAACGAACG CTGCGCGATG TGATCACCCA ATTGGAACCG GGATTGTTCA AGAAAGTTAC GGGGCTGACG GTGAAAGACT TTGAACTCCT CGTCAGCCTC GGCGTCTTCA ACAGCGCGCT GATGAACGAT GCAGTGTACA AGTTCAAGCG GTATGAAGAC CCAAGTCTGG TTTATACGGG TATTAACCGT CACGAAGGAG AAGATGTCGG ACTGTACGAT ACCGTCTTGC GCCGCGCGGA ATATGAGGCG ACATTGGTGC ATGAGGAAAG ATAG
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Protein sequence | MSNFFPPRPK VEPKIYAYKD TNPEYEGLLK IGYTTKSVQE RVAQQYPTLR PGGKLPYCIV LEEPAIRNDG TVFTDRDVHR MLRINGIRNE GGEWFRCTVE QVRAAINAVR AGQLLEEQRS LNFTMRPEQE AAVAKTMAYF QSYRRENGKP PHFLWNCKMR FGKTFAAYQL AKRMGWKKVL VLTFKPAVQS AWEEDLRCHV DFQGWQFIKP GGLTYEQADK NKPIVCFGSF QDYLGRNPKT GGIKAKNEWV HATHWHCVIF DEYHFGAWRE KAKDLFEGED EAERKASEGE AIDYFDEDIL PITSDHYLYL SGTPFRAIAT GEFIEEQIYN WTYSDEQKAK EEWDDSNGPN PYAALPRMVL MTYQLPDAIR EVAMQGEFNE FDLNVFFSAE GVGDKARFKY EDEVQKWLDL IRGAYLPTNL DNLRLGAQKP PLPYSDVRLL NVLTHTVWFL PSVAACYAMR NLLAKPHNKF YHDYKAIVAA GAAAGIGVNA LPPVLDAMGD PLKTKTITLT CGKLTTGVTV RPWTGIFMLR NTSSPETYFQ AAFRVQSPWT IQNPDGTSPN AELILKEECY VFDFAPDRAL RQIADYSCRL NVNEDDPEKK VEEFIHFLPV LAYDGSSMRQ IDAAGVLEMA MSGTTATLLA RRWESALLVN VDNDTLRRLI TNEQAMQALM NIEGFRNLNQ EIETIINKSE AVKRLKKEAN DRALSAQEKR ELTEEEKEFK SKRKQIQEKL IKLATRIPIF MYLTDHRERT LRDVITQLEP GLFKKVTGLT VKDFELLVSL GVFNSALMND AVYKFKRYED PSLVYTGINR HEGEDVGLYD TVLRRAEYEA TLVHEER
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