Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2195 |
Symbol | |
ID | 5539676 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2820044 |
End bp | 2820736 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640894328 |
Product | hypothetical protein |
Protein accession | YP_001432296 |
Protein GI | 156742167 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.478956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCA CGATGACAGC GGCAGCGCCG ATTGTCTACC CCGATAGCGA CGGGATGCCG ATGGCGGACA ACACGCAACA GTTTCGCGCG ATTGTGACCA TCCAGGGGAA CCTGGAGGCG CTGTTCCGCG ACCGCGCCGA TGTGTTCGTG GCGGGCGACC TGCTCTGGTA CCCGGTGGAA GGGCGCCCCG ACATCCGCCG CGCGCCGGAT GCGATGGTGG TCTTCGGGCG TCCGAAGGGC GACCGCGGCT CGTACCGGCA GTGGGAGGAG GAAGGGATTG CGCCGCAGGT GGTGTTCGAG GTGCTGTCGC CGGGGAACAC GCTGACGGAG ATGGCGGCGA AGTTTGAGTT CTACGACCGG TACGGAGTGG AGGAGTACTA CCTGTACGAC CCGGCGAGCG GCGACTTGAG CGGATGGCGG CGTGAGGGCG GACGGTTGCG GGTGATCGAA GAGATCGACG GGTGGGTGAG TCCGCGTTTA GGGGTGCGGT TCCGACGCGA GGGGGGCGAG GTGCGGATGT ACCTGCCGGA CGGGCGTCCA TTTCTAAGTT TTGTGGAACT GCAAGACCAA CTCGAGCGCG AGCGGCAGCG CGCCGAGGCG GAGCAGCAAC GTGCGGAAGC GGAACGGCAG CGCGCCGAGC GCCTGGCGGC GCGCCTGCGC GCTCTGGGCA TCGACCCGGA CGAGGACGTG TGA
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Protein sequence | MSSTMTAAAP IVYPDSDGMP MADNTQQFRA IVTIQGNLEA LFRDRADVFV AGDLLWYPVE GRPDIRRAPD AMVVFGRPKG DRGSYRQWEE EGIAPQVVFE VLSPGNTLTE MAAKFEFYDR YGVEEYYLYD PASGDLSGWR REGGRLRVIE EIDGWVSPRL GVRFRREGGE VRMYLPDGRP FLSFVELQDQ LERERQRAEA EQQRAEAERQ RAERLAARLR ALGIDPDEDV
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