Gene Rcas_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2195 
Symbol 
ID5539676 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2820044 
End bp2820736 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID640894328 
Producthypothetical protein 
Protein accessionYP_001432296 
Protein GI156742167 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.478956 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CGATGACAGC GGCAGCGCCG ATTGTCTACC CCGATAGCGA CGGGATGCCG 
ATGGCGGACA ACACGCAACA GTTTCGCGCG ATTGTGACCA TCCAGGGGAA CCTGGAGGCG
CTGTTCCGCG ACCGCGCCGA TGTGTTCGTG GCGGGCGACC TGCTCTGGTA CCCGGTGGAA
GGGCGCCCCG ACATCCGCCG CGCGCCGGAT GCGATGGTGG TCTTCGGGCG TCCGAAGGGC
GACCGCGGCT CGTACCGGCA GTGGGAGGAG GAAGGGATTG CGCCGCAGGT GGTGTTCGAG
GTGCTGTCGC CGGGGAACAC GCTGACGGAG ATGGCGGCGA AGTTTGAGTT CTACGACCGG
TACGGAGTGG AGGAGTACTA CCTGTACGAC CCGGCGAGCG GCGACTTGAG CGGATGGCGG
CGTGAGGGCG GACGGTTGCG GGTGATCGAA GAGATCGACG GGTGGGTGAG TCCGCGTTTA
GGGGTGCGGT TCCGACGCGA GGGGGGCGAG GTGCGGATGT ACCTGCCGGA CGGGCGTCCA
TTTCTAAGTT TTGTGGAACT GCAAGACCAA CTCGAGCGCG AGCGGCAGCG CGCCGAGGCG
GAGCAGCAAC GTGCGGAAGC GGAACGGCAG CGCGCCGAGC GCCTGGCGGC GCGCCTGCGC
GCTCTGGGCA TCGACCCGGA CGAGGACGTG TGA
 
Protein sequence
MSSTMTAAAP IVYPDSDGMP MADNTQQFRA IVTIQGNLEA LFRDRADVFV AGDLLWYPVE 
GRPDIRRAPD AMVVFGRPKG DRGSYRQWEE EGIAPQVVFE VLSPGNTLTE MAAKFEFYDR
YGVEEYYLYD PASGDLSGWR REGGRLRVIE EIDGWVSPRL GVRFRREGGE VRMYLPDGRP
FLSFVELQDQ LERERQRAEA EQQRAEAERQ RAERLAARLR ALGIDPDEDV