Gene Rcas_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2193 
Symbol 
ID5539674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2818490 
End bp2819224 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID640894326 
Producthypothetical protein 
Protein accessionYP_001432294 
Protein GI156742165 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CGATGACAGC GGCAGCGCCG ATTGTCTACC CCGATAGCGA CGGGATGCCG 
ATGGCGGACA ACACGCAACA GTTTCGCGCA ATCGTGACCA TCCAGGGGAA CCTGGAGGCG
CTGTTCCGCG ACCGCGCCGA TGTGTTCGTG GCGGGCGACC TGCTCTGGTA CCCGGTGGAA
GGGCGCCCCG ACATCCGCCG CGCGCCGGAT GCGATGGTGG TCTTCGGGCG TCCGAAGGGC
GACCGCGGCT CGTACCGGCA GTGGGAGGAG GAAGGGATTG CGCCGCAGGT GGTGTTCGAG
GTGCTGTCGC CGGGGAACAC GCTGACGGAG ATGGCGGCGA AGTTTGAGTT CTACGACCGG
TACGGAGTGG AGGAGTACTA CCTGTACGAC CCGGCGAGCG GCGACTTGAG CGGATGGCGG
CGTGAGGGCG GACGGTTGCG GGTGATCGAA GAGATCGACG GGTGGGTGAG TCCGCGTTTA
GGGGTGCGGT TCCGACGCGA GGGGGGCGAG GTGCGGATGT ACCTGCCGGA CGGGCGTCCA
TTTCTGAGTT TTGTGGAGGT GCAAGAGCAG TTGGATCGCG AACGGCAGCG CGCCGAGGCG
GAGCGGCAAC GCGCGGAAGC GGAACGACAG CGCGCCGAGG CGGAGCAGCA ACGCGCGGAA
GCGGAACGGC AGCGCGCCGA GCGCCTGGCG GCGCGCCTGC GCGCCCTGGG CATCGACCCG
GACGAGGACG TGTGA
 
Protein sequence
MSSTMTAAAP IVYPDSDGMP MADNTQQFRA IVTIQGNLEA LFRDRADVFV AGDLLWYPVE 
GRPDIRRAPD AMVVFGRPKG DRGSYRQWEE EGIAPQVVFE VLSPGNTLTE MAAKFEFYDR
YGVEEYYLYD PASGDLSGWR REGGRLRVIE EIDGWVSPRL GVRFRREGGE VRMYLPDGRP
FLSFVEVQEQ LDRERQRAEA ERQRAEAERQ RAEAEQQRAE AERQRAERLA ARLRALGIDP
DEDV