| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2176 |
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| Symbol | |
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| ID | 5539657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2798191 |
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| End bp | 2799387 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894310 |
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| Product | ABC transporter related |
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| Protein accession | YP_001432278 |
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| Protein GI | 156742149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000568718 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATTCGC ACCTCCATGT GAACTTTATC AAGCGCCTGG GGAATGTCAC CCTTCAGATG
CGCTTTTCCG TTGATACGGA AATCCTGGTG CTCTTCGGTC CTTCCGGAGC CGGGAAAACG
CAGACGCTCC AGGCAATCGC CGGTCTGTCT ACGCCGGATA GCGGTTTGAT CGCACTCAAT
GATACAACCT TTTTCCAGCG CATGTCAGGA AAACCGATCA TCAATTTGCC TGCGCGCAAA
CGTCGCATTG GGTATGTGTT CCAGCAGTAT GCGCTCTTTC CTCATATGAG CGCCATCGAG
AATGTGGCGT TTCCACTGGC GGGGCGGCGC GATGCGCGGG ATCGCGCCAT GGAGTTGCTG
GAACGCATGC GCCTGGCACA CCTCGCACAG CGTATGCCAC ACGAATTGTC GGGAGGGCAG
CAGCAGCGGG TTGCAATAGC TCGCGCTCTG GCGACCGAGC CGCGCGTCCT GCTGTTTGAC
GAGTCCTTTT CGGCGCTGGA TCGTCCTATT CGTGAACGGC TCCACGACGA GATCCGCGCG
CTTCAGGCGG AGCGTCGCCT GATTGTGATC TACGTCACCC ATAACCTTGA CGACGCCTTT
GCCGTTGGGC ATCGCCTGGC GGTCGTGCGT GACGGTCGGA TCGAACAGAT CGGAAATATC
GAGGATGTGT TCACGCGACC GGCAAATTCG CAGGTGCTCA CTATTCTGGG TATTCCGAAC
GCAATCCGCG CGCGCGTCAC CAGAACCGGA CCATCCGGCG CGCTGCTCGA TTGGGACGGG
ATCGCACTCG AAGCGCCACC GCTCGATGCG TCTCCCGGAG CGCAGGTGGT GGCGTATATT
CGCCCGGAGG ATATTCGGTT GATCTATCCT GACCGCCCGC TCAGCCGCGT TGTGGGCACG
AATCATCTGG ATGGCATTGT CGCCGAACGA CGCCTGGGGC GTCACATCCA TCACCTGCGC
GTTGCGCTGC CCGATGGCCG ACAGATCGAA GCGGTCTATC CGGCGTCGTC ATACGCATCC
ATGAACCTGA CGCCGGGCGG GCGAGTGCGC CTGGCGCTGC GCAAGGAGAG CATTGTCATC
ATTGCTCCCC ATCAGAGTTC AGCGCCGATC AAGGATGGAA TCCGCCCGGA TGGGACGAAT
CGCACCAATG ATGGTTCTGC GAGCGATCCC GTTCCGGATT CGTTGTCGCT GCTGTAA
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| Protein sequence | MNSHLHVNFI KRLGNVTLQM RFSVDTEILV LFGPSGAGKT QTLQAIAGLS TPDSGLIALN
DTTFFQRMSG KPIINLPARK RRIGYVFQQY ALFPHMSAIE NVAFPLAGRR DARDRAMELL
ERMRLAHLAQ RMPHELSGGQ QQRVAIARAL ATEPRVLLFD ESFSALDRPI RERLHDEIRA
LQAERRLIVI YVTHNLDDAF AVGHRLAVVR DGRIEQIGNI EDVFTRPANS QVLTILGIPN
AIRARVTRTG PSGALLDWDG IALEAPPLDA SPGAQVVAYI RPEDIRLIYP DRPLSRVVGT
NHLDGIVAER RLGRHIHHLR VALPDGRQIE AVYPASSYAS MNLTPGGRVR LALRKESIVI
IAPHQSSAPI KDGIRPDGTN RTNDGSASDP VPDSLSLL
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