| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2163 |
|---|
| Symbol | |
|---|
| ID | 5539643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2778765 |
|---|
| End bp | 2779778 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640894296 |
|---|
| Product | protein serine/threonine phosphatase |
|---|
| Protein accession | YP_001432265 |
|---|
| Protein GI | 156742136 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.000269356 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGTT CCGCTCCTGA AAGCAGGCGC CCTATGAGCG AAGACATGCC CCCTGAACAA
CCGACGGCAC CCGCCTCCGA TCACGCTGAT CCGGCGTGGT GGTCTGATGT GAGCGGCGAA
AGTGATGGCA CACGCCCGCT CGACACGCAT GCGGTACTGG CGCAGGCGGA GACGACCGAC
CGCCGACCTG GCGAAACTGA ACCACTCGAC GATGATACAA CGCTGCGTGA AACGCCGCCG
CCTCCGCCGG CAATCGCGGC TGCTGCGATG CGGCACATCG GTCAGGTGCG CGCAACGAAC
CAGGACGCGA TCTACACGCT GATCAGCAGC ATCCCGCGCG AAGCCGGCGA CGCAACTCTT
GGCTTGTTCG TTGTCGCCGA CGGCATGGGT GGGCACGAAG GGGGTGAGAT TGCCAGTCGC
ATGGCGGTAG CAGCCGTCGC CCGGCGCGTC ATCGCCGACC TCCTCATTCC GGCTATCGAG
GGGACCATTC ATGTCTCGCT TCAGGCGTTG ATGGTCGAAG CCGTCCAGGA CGCCAACCGC
GCTATCTGGG AGCATGCCCG GTTGGCCGGA TCGGACATGG GCACCACCTG CACTGCGGCG
CTGTTGCTGG GTCGATCCCT CTACATCGGT CATGTCGGTG ATACACGCGC CTACCTGATC
GATACTGGCG GCATCCATCA GTTAACGACC GATCATTCAG CGGTCGGACG GTTGATCGAG
ATGGGACAAC TCGACCCAAC CGAGGCGCGG GATCATCCGC TGCGCTCTCA GTTGTACCGC
ACTGTCGGGC AACACCCGGA GATTGCGGTC GATCTGGTGT TTCAGCCCAT CGGCGATGCG
ACCCATCTGC TCCTCGCCAG CGACGGTCTG TGGGGATGCG TCGAAGAGGA GACGATGCTG
CGCATTGTGC GGGGGATCGA AAGCCCGCAG CGCGCCGTGC GCGCTCTGGT CGATGCTGCT
AATCGCGCTG GCGGACCGGA TAACATTGCT GCGATTCTCG TCCGACTGGT GTAG
|
|---|
| Protein sequence | MQRSAPESRR PMSEDMPPEQ PTAPASDHAD PAWWSDVSGE SDGTRPLDTH AVLAQAETTD
RRPGETEPLD DDTTLRETPP PPPAIAAAAM RHIGQVRATN QDAIYTLISS IPREAGDATL
GLFVVADGMG GHEGGEIASR MAVAAVARRV IADLLIPAIE GTIHVSLQAL MVEAVQDANR
AIWEHARLAG SDMGTTCTAA LLLGRSLYIG HVGDTRAYLI DTGGIHQLTT DHSAVGRLIE
MGQLDPTEAR DHPLRSQLYR TVGQHPEIAV DLVFQPIGDA THLLLASDGL WGCVEEETML
RIVRGIESPQ RAVRALVDAA NRAGGPDNIA AILVRLV
|
|---|
| |