Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2157 |
Symbol | |
ID | 5539637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2770716 |
End bp | 2771723 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640894290 |
Product | tryptophanyl-tRNA synthetase |
Protein accession | YP_001432259 |
Protein GI | 156742130 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0180] Tryptophanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00233] tryptophanyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00108936 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCAAC CGAAAAAACG AATATTGACC GGCGACCGTC CAACTGGACG CATGCACCTG GGGCACTATG TTGGCACATT GGCAAACCGG GTGCGCTTGC AGGACGAGTA CGAATGCTTC TTCCTGGTCG CCGACCTGCA CATGCTGACC ACGCGCACCG AACTCGAGCG TCTGCGCCAG ACCGGTGAGA ATATTCGGCA TGTGGTGCTC GATAATCTGA GTGTCGGGAT CGACCCGGAG AAATCGACCT ACTTCCTCCA GTCGATGGTG CCGGCAATCA GTGAAATCGC GCTGATCTTC GGCATGCTGA CGACCGTTCC GCGCCTGCAA CGCGTGCCGA CGCTGAAAGA AGTCATGCAG GACCTGCACA TCGAGCAGCC ATCCTATGGG TTGCTGGGGT ATCCGGTGCT CCAGGCCGCC GACATCCTCT GTGTGCGCGC CGATCTTGTG CCGGTCGGCA AGGATCAGGC GTCGCACCTG GAAGTGACAC GCGAAATTGC GCGTCGCTTC AACACCCTCT ACGGTGAGGT GCTGCCCGAA CCCGAAACCC TGATTGGCGA TGTGCCGACG CTGGTGGGAA TCGATGGTCA GGCGAAGATG TCGAAAAGCC TGGATAATGC CATCTACCTG AGCGATGACG CCAGGACTGT CGAGGAGAAG GTGCGCCGGA TGTACACCGA TCCCAACCGC ATTCGCGCCG ATATTCCCGG CACGGTCGAA GGGAATCCGG TGTTCATCTA CCACGACGCT TTCAATCCGA ATGCCGATGA AGTGAACGAT CTCAAGGAAC GATACCGCCA GGGGAAAGTC GGCGATGTCG AGGTGAAGCG CAAACTCGCG GCGGCGATCA ACGCCTTCCT CGATCCGATC CGCGAACGAC GCGCGCAGTA CGAACGCAAC CCGCGCATCG TCGAGGAAAT TCTGGCTGCC GGTTCCGCCC GCGCGCGCGC CGAAGCCGAC AAAACCCTCA ACATGATGAA AGAGGCGATG GGGCTGAAAT TCATCTGA
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Protein sequence | MTQPKKRILT GDRPTGRMHL GHYVGTLANR VRLQDEYECF FLVADLHMLT TRTELERLRQ TGENIRHVVL DNLSVGIDPE KSTYFLQSMV PAISEIALIF GMLTTVPRLQ RVPTLKEVMQ DLHIEQPSYG LLGYPVLQAA DILCVRADLV PVGKDQASHL EVTREIARRF NTLYGEVLPE PETLIGDVPT LVGIDGQAKM SKSLDNAIYL SDDARTVEEK VRRMYTDPNR IRADIPGTVE GNPVFIYHDA FNPNADEVND LKERYRQGKV GDVEVKRKLA AAINAFLDPI RERRAQYERN PRIVEEILAA GSARARAEAD KTLNMMKEAM GLKFI
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