| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2145 |
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| Symbol | |
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| ID | 5539625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2754592 |
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| End bp | 2755584 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894279 |
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| Product | hypothetical protein |
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| Protein accession | YP_001432248 |
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| Protein GI | 156742119 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000290055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00549426 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGAGA GTGAGCCAGA GACGCCAGCG GTGCGCCACT CACCACGCGC GGTTCCGCGC
ACCGACACAC ACTCGTCGGC GCGCCGCCCC AACCCGCTGG CGCGATCACG CGATCCCTTC
GATGATGGTG CGGCGCTCAC GATTGGACGC CGCCGCCTTG TCGATCGGCG CATTGATGTT
CAGGAACGTT TGCCTGTCGC TCCGTCGTTT GCTCCGTGGG CAGCGGAAGA ATTGCTCGCA
CCGGATGACC CCTTCGATGA CGATGCGCGC GATATGTTGC GTGCGGAACT GACTGCCACG
CCATTCGCCT ACCGACCGGC GACGCTCCGG CGAACCGTTC GGCAGCGGAT GTTTCCCTGG
TGGCTGATCG GAATTTGCGC AATCTGTATT GGTGTCCTCT TTTTCTTCTG GCGCGATACC
AATGCATCAC GTATCTGCTT CGCTCCTGGA TGTACCGCGC GCGAACAGAC AATACAGGCG
CATAGGTTCG AGCAGGCGCT CAATCTCACT TCACCTGCTG GACAGCATTC GGTGCTTGGT
CCGCCGAGCA TTTCGGCGCA GCAGATCGAC CGCATCCTTG CCGAGTGGAA CTCTCCAGCG
GTCGGCACCG GCGCCACGTG GGTGGAACTC GGCATCCGGT ATGGCATCGA TCCCGCGTAT
GCCCTGGCAT TTTTCATTCA CGAGTCGGGC GCCGGAACCG CACCAGGATG GGCAGGGCGA
AAACCAGATG GCAGTACGAC CCACAATGTC GGCAACATTA TCTGCGCCGG GTATCACACG
TGCTACGGCA GGTTTCGCGA TTATGCCAGT TGGGAGGAAG GGATCGAAGA TTGGTATCGC
CTGATAGCAG TTGAATATGT GCAGTGGCGC GGCGCTCATA CCGTCGAGGA GATTGTGCCG
ATCTATGCGC CGGTGGTGGA AAATAACGTC CCCGTGTATG TCGGTACGGT CAACCGCCTG
GTTGCCGAAT GGCGCTCATC GCAAGCAAAA TAA
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| Protein sequence | MNESEPETPA VRHSPRAVPR TDTHSSARRP NPLARSRDPF DDGAALTIGR RRLVDRRIDV
QERLPVAPSF APWAAEELLA PDDPFDDDAR DMLRAELTAT PFAYRPATLR RTVRQRMFPW
WLIGICAICI GVLFFFWRDT NASRICFAPG CTAREQTIQA HRFEQALNLT SPAGQHSVLG
PPSISAQQID RILAEWNSPA VGTGATWVEL GIRYGIDPAY ALAFFIHESG AGTAPGWAGR
KPDGSTTHNV GNIICAGYHT CYGRFRDYAS WEEGIEDWYR LIAVEYVQWR GAHTVEEIVP
IYAPVVENNV PVYVGTVNRL VAEWRSSQAK
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