Gene Rcas_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2132 
Symbol 
ID5539612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2741682 
End bp2742518 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content56% 
IMG OID640894266 
Producthypothetical protein 
Protein accessionYP_001432235 
Protein GI156742106 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000294324 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0323072 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGTCCA CACTTCGTCT TTCCACCGAC GAATTGGCGT TTGCGTTGCT GTTGAGCGAT 
CAGCCTGTTG CGGCTCAGCA GGTGTTGGTG AGCAGCATCG GGCGCGAGTT GAGCAAGGAG
GAAGCGCAAG GCCGGTTGTC GGCGGCGGGG AATGCGCTCT TTGGTCAGGG ATTAGTTGAT
ATTCGAGACG ATGGATCAAT TGTTTCCTCA CCGGTTTTGA CAGAAGTCAG TCTCGTTCTC
ACCCGGGCTG CTGCTACGCT GCGTTTTACA TTATCGGCGC CGACCGGTCA GCGCGCGCTC
TCGTATCATT TTCTCGATGA TGCCATCTAT GAGCACTGGG TAGATCGCGG CGTGGCTCAC
GTGGTGTCGC GAGTGAGTGA AGACGCGATT ATGGAGGGGT GTGTTGCGTT TTTTAATCTT
AGCGATCTGC AAGAGATTGC AGTGGCAACC GGAATGCTTC CCGACGCCGT CTTTCGCCAG
GCGTTACGCC AGCACGATGT AACCGCGACA ATTGGTTTGT TGCGTGACTA TGGAATAGCT
GAAGACACCG GCATGCTGCT AGCGGAAGAT ATGGTCCATA CGCAAGCAAT CGGCGATATG
CTGGCCATTT ACTATCATGG TGACAATCGC GCGCCGATGT CGGACGAGGG CTGCCTTGTG
GTATTAGGGC AGCAGCGCTT CTGGCTCTTC CAACCGGTGA AACAAGGTGA GGATGTCCAG
GTGATGTTAC TGCCTGGCAC AATCGACTCG GTGCGTGAGC AGGTACAGCG CCTGACGCGC
GTTTGCCGGC AGATTGCAGC ACGAGAAGCA GCGGTGGCGA GGACGGGAAA GGAATAA
 
Protein sequence
MVSTLRLSTD ELAFALLLSD QPVAAQQVLV SSIGRELSKE EAQGRLSAAG NALFGQGLVD 
IRDDGSIVSS PVLTEVSLVL TRAAATLRFT LSAPTGQRAL SYHFLDDAIY EHWVDRGVAH
VVSRVSEDAI MEGCVAFFNL SDLQEIAVAT GMLPDAVFRQ ALRQHDVTAT IGLLRDYGIA
EDTGMLLAED MVHTQAIGDM LAIYYHGDNR APMSDEGCLV VLGQQRFWLF QPVKQGEDVQ
VMLLPGTIDS VREQVQRLTR VCRQIAAREA AVARTGKE