Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2132 |
Symbol | |
ID | 5539612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2741682 |
End bp | 2742518 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640894266 |
Product | hypothetical protein |
Protein accession | YP_001432235 |
Protein GI | 156742106 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000294324 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0323072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTCCA CACTTCGTCT TTCCACCGAC GAATTGGCGT TTGCGTTGCT GTTGAGCGAT CAGCCTGTTG CGGCTCAGCA GGTGTTGGTG AGCAGCATCG GGCGCGAGTT GAGCAAGGAG GAAGCGCAAG GCCGGTTGTC GGCGGCGGGG AATGCGCTCT TTGGTCAGGG ATTAGTTGAT ATTCGAGACG ATGGATCAAT TGTTTCCTCA CCGGTTTTGA CAGAAGTCAG TCTCGTTCTC ACCCGGGCTG CTGCTACGCT GCGTTTTACA TTATCGGCGC CGACCGGTCA GCGCGCGCTC TCGTATCATT TTCTCGATGA TGCCATCTAT GAGCACTGGG TAGATCGCGG CGTGGCTCAC GTGGTGTCGC GAGTGAGTGA AGACGCGATT ATGGAGGGGT GTGTTGCGTT TTTTAATCTT AGCGATCTGC AAGAGATTGC AGTGGCAACC GGAATGCTTC CCGACGCCGT CTTTCGCCAG GCGTTACGCC AGCACGATGT AACCGCGACA ATTGGTTTGT TGCGTGACTA TGGAATAGCT GAAGACACCG GCATGCTGCT AGCGGAAGAT ATGGTCCATA CGCAAGCAAT CGGCGATATG CTGGCCATTT ACTATCATGG TGACAATCGC GCGCCGATGT CGGACGAGGG CTGCCTTGTG GTATTAGGGC AGCAGCGCTT CTGGCTCTTC CAACCGGTGA AACAAGGTGA GGATGTCCAG GTGATGTTAC TGCCTGGCAC AATCGACTCG GTGCGTGAGC AGGTACAGCG CCTGACGCGC GTTTGCCGGC AGATTGCAGC ACGAGAAGCA GCGGTGGCGA GGACGGGAAA GGAATAA
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Protein sequence | MVSTLRLSTD ELAFALLLSD QPVAAQQVLV SSIGRELSKE EAQGRLSAAG NALFGQGLVD IRDDGSIVSS PVLTEVSLVL TRAAATLRFT LSAPTGQRAL SYHFLDDAIY EHWVDRGVAH VVSRVSEDAI MEGCVAFFNL SDLQEIAVAT GMLPDAVFRQ ALRQHDVTAT IGLLRDYGIA EDTGMLLAED MVHTQAIGDM LAIYYHGDNR APMSDEGCLV VLGQQRFWLF QPVKQGEDVQ VMLLPGTIDS VREQVQRLTR VCRQIAAREA AVARTGKE
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