Gene Rcas_2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2131 
Symbol 
ID5539611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2740405 
End bp2741562 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content52% 
IMG OID640894265 
Producthypothetical protein 
Protein accessionYP_001432234 
Protein GI156742105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000980684 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0372378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATTG GCGCTGACAT CGATCAACTC TACACAACCA TTGCACTGTT TCGGCGCAGC 
AGAGCAGAGA TGAGCGATAC ATTCCAGCGT GCGCGACAGG CGATGCAGGC GATGCAGAAC
AGCCCATGGT CCGGGCAGAA TCGCCAGCAG GCTGAGGCGG TCTGGGAACA GATCCAGACT
CAGTTTGCGT CTGTTATCGA CGAACTTGAA GGCTTGACTG CGCGCACCGA ACGATTTGCC
AACAATCTGG CAGAGGCAGG GCGGAGTTTT TACGATCCGG CGCGTATCAA TACATCAGAT
ACAATTGGTA AGGTGCTGAA GTATGCAGAG GTGGGTGCAG ATATTATACA AAAACTTAAA
AAAATAATTG TAGGATCAAA ATATATTCGG GAAATAAAAT TGGTTAGAGA AGGTCTACAA
ATAGTCCACG GTTCTACCTA TCCCAAACAA TTGATTTTGA AAGGTAGCCA CGAAGTATTC
GAGATGGCGT TTCTCAACCC GCATCTTCGG CATTTGAAGG GAGAGTGGAA AAATATTGCT
CAGAAACTTG TTCTTGACCC TACGAAGAAT GCCACAAAGG ATGCCGTTTC TGACGCTCTC
AAGGTATTGC CCCTCGACTT TGCCCTTAAC GTCGCCTCTA ACGCATCTGA TAACTGGGAG
GCCTACAAGG GCGATCCGCA GCACTGGCAA AAGGCGGTAG TTGGCACCGC AATCGATGCA
ACCGTTGACA CAGCATTGTC GGCGGCCGGG ACAGTGGTCG GAACAGCGGT AGGCGGCGCA
GTCGGTGGCG CGTTGCTCGG CGCGATCAGT GGCGGAACGT TAGCGCCGCT GGGCGTTGCC
ATTGGCGCGC GAGTGGGTGG ATTCGCGGGC GGGTGGGCAG CAGAGAGGGT TAGCGAATGT
CTAAAGGAGC AAGACTGGTA CAAAGATCTG AAAAAAGTTG GCGTTCAGAA GGGTGCTGAT
TTCATCGATC AGAGCGTTCA GACAGCGCAA CAGACGATGG AGTCAGTCGC ACAAGAAGGT
CAGCGGGTCC TGGAGCAGAC CCAGGAAAAA GTGGCAGCAA TCGCGGACAA AAGTCAACAG
TTATTGGAGC AAGGACAACA GGTGCAGCAG GCAATGAGTG GCTGGGTTAG CCATAAATTG
GGTCTTCAGT TCAGGTAG
 
Protein sequence
MLIGADIDQL YTTIALFRRS RAEMSDTFQR ARQAMQAMQN SPWSGQNRQQ AEAVWEQIQT 
QFASVIDELE GLTARTERFA NNLAEAGRSF YDPARINTSD TIGKVLKYAE VGADIIQKLK
KIIVGSKYIR EIKLVREGLQ IVHGSTYPKQ LILKGSHEVF EMAFLNPHLR HLKGEWKNIA
QKLVLDPTKN ATKDAVSDAL KVLPLDFALN VASNASDNWE AYKGDPQHWQ KAVVGTAIDA
TVDTALSAAG TVVGTAVGGA VGGALLGAIS GGTLAPLGVA IGARVGGFAG GWAAERVSEC
LKEQDWYKDL KKVGVQKGAD FIDQSVQTAQ QTMESVAQEG QRVLEQTQEK VAAIADKSQQ
LLEQGQQVQQ AMSGWVSHKL GLQFR