Gene Rcas_2125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2125 
Symbol 
ID5539605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2732085 
End bp2732933 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content58% 
IMG OID640894259 
ProductFHA domain-containing protein 
Protein accessionYP_001432228 
Protein GI156742099 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.473494 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.523626 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGT ATGAACTGTG GCGCTATCTC GAGCAGTATG CGCAGATGAG CAACGCCTGG 
TGGTACTCTG TTGCCGTATT ACCGGCCACG ATCATTTCGG CCTGCGCCTA TTTCCTGATG
TGGCTGGCGC TGCGTCGCAC TCGTCAGCTG CCGAAGATGT TTCTCTGGCT CTGCGTCGCC
AGCCTGCCGA CGATTCTGGT GGCGCCGTCG TTTTATGTCA GCACCAACCT GACCGATGCG
CTGGCGCGCG TCGGGTTCGG CATGCCGGCG AGCGAACAGC AGATCAGCCG CACCGTTGCC
CTTCAGATCG GTGCGTACCT CAGTCAGGTC GCCACACTTG GCATCGTCGG CGCATCACTG
GCGTTCGTGA CGCTCATCGC CGCCATCCTG GTCGGCGGGT ACGCGCCGCC ACAGGTAATC
CAGAGCATTC AGTCCATATC ACAGAGTTTT TCAAAGGCGA TGACACGCGC TTTCGGACCG
TCACGTGAAG CGCGGGTTGC CAACTCAAAA TATGGCGTTC TCACGGTTAC ACGCGGCGGA
GCGCAGCAAG GAGCGAAGTT CAGCGTAATC AACAGCGCAA TTATTGGCAA AGTTGAAGCG
CACATTGTCG TCACCGATCC GGTCGTGTCG CGTAAGCACG CGCGTCTTGA GGTGAAGAAC
GATACGGTCT TTCTCGTCGA CCTGGGAAGC ACCAATGGCA CGTTCGTCAA GCGCAGTGGA
CGCGAGTTTG AACTGAACGG CGACCCGTTT GAGTTACGCC ATGGCGATTA TATCTATCTC
GGCGTTCCAT CCGAACCAGA GTCGGTGGAA CTGATCTATG AGCGTTCTCC CGCAGGAGGT
CAGTCATGA
 
Protein sequence
MTEYELWRYL EQYAQMSNAW WYSVAVLPAT IISACAYFLM WLALRRTRQL PKMFLWLCVA 
SLPTILVAPS FYVSTNLTDA LARVGFGMPA SEQQISRTVA LQIGAYLSQV ATLGIVGASL
AFVTLIAAIL VGGYAPPQVI QSIQSISQSF SKAMTRAFGP SREARVANSK YGVLTVTRGG
AQQGAKFSVI NSAIIGKVEA HIVVTDPVVS RKHARLEVKN DTVFLVDLGS TNGTFVKRSG
REFELNGDPF ELRHGDYIYL GVPSEPESVE LIYERSPAGG QS