| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2098 |
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| Symbol | |
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| ID | 5539578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2693476 |
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| End bp | 2694993 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640894233 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
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| Protein accession | YP_001432202 |
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| Protein GI | 156742073 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes)
[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.303697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGA TCGATCTGCC GGCCAATGTG CCGTGGCTCA GCCTGATATG GCTTAGCCTG
GTGATCCCGA CACTTATCAT TGCGCTGCTG AAACCGGAGC AGAAGCAGGA GATTCGCATC
GTCGGCGCGG TTTTCGCGTT TATCTCGCTG GCGCTGACGC TGCTGGTCTA TCTTGCGTAT
GACTACCGCA GCCCGGAAAA GTTTCAGTTT CTCGAAGAAA CCCCCTGGCT ACCGGAACTC
GGCATCAACT ACATTCTCGG CGTCGATGGG ATCAGCCTGC CAATGCTGCT GCTCAATGGA
CTGGTTATTT TTACCGGCGC GCTGATCAGT TGGAATATCG AGGAACGAAC ACGCGAGTAT
TGGGCGTTAC TGCTGCTGCT GGCTGCAGGA GTGTACGGCG TCTTCGTGTC GCTCGACCTC
TTCCTGCTCT TCATTTTCTA CGAACTGGCG GTGCTGCCGA TGTACCTGCT GATCGGCATC
TGGGGGAGCA CGCGCAAAGA GTATGGTGCG ATGAAACTGA CGCTCTATCT GATGGGCGGG
TCGGCATTTA TCATTCTGGG GATGGTCGCT GTCTACTTCA GTGGCACGCT GCGCACCTTC
GACATGCGCC TGCTGGCGCA ATCGGCGTTG TTCACCCGCG ATGTGCAGAT TATTTTCTTC
GTACCGCTCT TCCTGGGCTT CGCAGTGCTG GCGGGCATGT TTCCGTTCCA TACCTGGTCG
CCAACCGGTC ACGTCGCTGC GCCAACGGCC GTTTCGATGC TCCATGCGGG CGTATTGATG
AAACTGGGGG CGTATGGCTG TCTGCGTGTG GCGATGTGGA TCTTTCCCGA AGGCGCCAAT
TACTGGTTAC TGCCGATTGC CATCGCTACA CTGATCAATG CAGTCTATGG CGCGACCATT
GCGATGACGC AGCGCGATTT CAAGTTCATG ATCGGGTATT CGTCCGTCAG CCACATGGGA
TTGACGCTCA TGGGTCTGGC GGCGGCCAAC ACGATTGGTA TGACCGGCGC GGTGCTTCAG
ATGTTCGCGC ACGGCGTGAT GACGGCGCTG TTCTTCGCGG TTGTTGGGCG AATGGTGTAC
GACCGGACGC ACACCCGGCA GTTTCCTGAA CTCGGGGGAT TGTTCGCCGT CATGCCATTT
GCAGCGATTG TCTTCATCAT CGCCGGGCTT TCATCGATGG GTATGCCGGG GCTGGCAGGA
TTTTGGGCGG AGTTCAACAT TTTTATGGGC ATGTGGCAAC GCTTTCCGCT GATCGCAGTG
CTGGCAGGCA TTTCGATTCC AATCACGGCG GGGTATATTC TGATTGCCGT GTACCGGGTG
TTCTTTGGCG AACTGAAAAA CCCCGAATTT CGCACCCTCC CCAAATTAAC GGCCCAAGAG
TATGCAGCCG GCGTTATTCT GGTCGTGGTG TTGATCATCA GCGGCATCTA CCCGGCGTAC
CTGACCGAGC CGATCGAGGC GAGCGTGCAG CCAATCGCCG AGGCGCTGGC GCGCGCCGGA
ACATTGGGGA TGCGGTAG
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| Protein sequence | MNLIDLPANV PWLSLIWLSL VIPTLIIALL KPEQKQEIRI VGAVFAFISL ALTLLVYLAY
DYRSPEKFQF LEETPWLPEL GINYILGVDG ISLPMLLLNG LVIFTGALIS WNIEERTREY
WALLLLLAAG VYGVFVSLDL FLLFIFYELA VLPMYLLIGI WGSTRKEYGA MKLTLYLMGG
SAFIILGMVA VYFSGTLRTF DMRLLAQSAL FTRDVQIIFF VPLFLGFAVL AGMFPFHTWS
PTGHVAAPTA VSMLHAGVLM KLGAYGCLRV AMWIFPEGAN YWLLPIAIAT LINAVYGATI
AMTQRDFKFM IGYSSVSHMG LTLMGLAAAN TIGMTGAVLQ MFAHGVMTAL FFAVVGRMVY
DRTHTRQFPE LGGLFAVMPF AAIVFIIAGL SSMGMPGLAG FWAEFNIFMG MWQRFPLIAV
LAGISIPITA GYILIAVYRV FFGELKNPEF RTLPKLTAQE YAAGVILVVV LIISGIYPAY
LTEPIEASVQ PIAEALARAG TLGMR
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