Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2080 |
Symbol | |
ID | 5539560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2670253 |
End bp | 2671491 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640894215 |
Product | protein of unknown function DUF395 YeeE/YedE |
Protein accession | YP_001432184 |
Protein GI | 156742055 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAATG CATTGCCAGG GAGCAGCCCG ACTGATCGGG CTGCTCCTTC CAAAACTGAA TTGACTGCGG CGGACGTTCT GCGGTATGGC GGTGCATTGC TGATGGTTGC TGCTCTGCTG GGTGGCGCAT ATCTGCTCCA GGCGATGCCG GGGCGTGGTT CGGCGGCGGC GCTTTCCCTG CTGATCGGCG CCGCGCTCGG TGTCGCCTTC GAGCGCGGGA GGTTCTGTTT CTTCTGTATC TTCCGCGATT TCATCGAGTA TCGCAATGCA GGTCCGCTCT CTGCGATCCT GATGGCGCTG GCGGTGAGCG GTATCGGGTA TGCCATCGTC TTCGGCGCAT TCCTGCCCAA CCCGGCAGGC GGTCGGCTGG CGCCTGATGC ACATATCGGT CCGGTCAGTC CGGCGCTGGT GGCTGCCGGT CTGATGTTCG GCTTGGGGAT GGCGCTCTCG GGTGCGTGTA TCAGCGGCCA TCTGTACCGC CTGGGAGAGG GATCAGGCTA TGCGCCGCCG GCGCTCATCG GCGCGCTGAT CGGCTTTGGG CTTGGATTCC GAACATGGAA CTGGCTCTAT GCGATGGTGA TCGCCGATGC GCCGGTTGTC TGGTTGCCGC ATTGGGTCGG CTACGGCGGG TCACTCCTTT TGCACCTGAC AGTTCTTGGC ATCCTGGCGC TGATGCTCCT GCGCTTCGTC CCGCCGCTGC CGCCCCGTCC CGCCCGTCAA CTCGACATAA CGTATTTGCG CGAAGCGCTC TTCCGTGACC GCTGGAACCC GCTCGTGACC GGCGCTATGG TCGGGATCAT CAGCGTTGTA GCATATCTGC GGGTTGAACC GCTTGGCGTT ACAGCGCAAC TCGGCAGTGC GACGCGAACG GTGATGAACT GGGCGGGATG GCTGCCGGAC CGCCTCAACG GTCTGGATAG TTTCGCCGGT TGCGCCACGC AGGTGGTGCA GACCATCACC GACAACGGTT GGCTGATCGG CGGGTTGGTG CTGGGAGCGT TCAGTGCTGC GCTGCTCGCC GGGCGTTTTC AGCCGGCATT GCCGCGCGCT TGGGGGAGTG TCACTGCGCT GCTCGGCGGG GTGTTGATGG GATGGGGTGC GATGACGGCG CTTGGCTGCA CGGTGGGAAC GCTGCTCTCC GGTATCGCTG CATTTGCGCT ATCGGGGTGG GTGTTTGGCG CCGCCGTCTT CGTCGGCGTG TGGCTTGGCA TCACATTGCG CTTGCACCGG TGGGTGTAG
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Protein sequence | MSNALPGSSP TDRAAPSKTE LTAADVLRYG GALLMVAALL GGAYLLQAMP GRGSAAALSL LIGAALGVAF ERGRFCFFCI FRDFIEYRNA GPLSAILMAL AVSGIGYAIV FGAFLPNPAG GRLAPDAHIG PVSPALVAAG LMFGLGMALS GACISGHLYR LGEGSGYAPP ALIGALIGFG LGFRTWNWLY AMVIADAPVV WLPHWVGYGG SLLLHLTVLG ILALMLLRFV PPLPPRPARQ LDITYLREAL FRDRWNPLVT GAMVGIISVV AYLRVEPLGV TAQLGSATRT VMNWAGWLPD RLNGLDSFAG CATQVVQTIT DNGWLIGGLV LGAFSAALLA GRFQPALPRA WGSVTALLGG VLMGWGAMTA LGCTVGTLLS GIAAFALSGW VFGAAVFVGV WLGITLRLHR WV
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