Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2076 |
Symbol | |
ID | 5539556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2662818 |
End bp | 2663960 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894211 |
Product | IS605 family transposase OrfB |
Protein accession | YP_001432180 |
Protein GI | 156742051 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGA CCTTCGTCTA TCGCCTGTAT CCGAGCAAAC CGCAAGCGCG GCGGCTGGAC AGCACGCTCG AAACCTGCCG ACGCTGGTAC AACCAGTGTC TTGCCGAGCG GCGCGATGCG TACCAGCAGC GTGGCGAGAC GGCGGGCAAG TTCGCGCAAC TGGCGAAGGT GAAGGAGTAC AAGGCGCTCA ACCCGCATGC TAAAGGCATC CATAGCCATG TGTTGCAAGT GGTCGTGTCT GATCTGGACA AGGCGTTTCA GGCGTTCTTC CGACGCGTGA AGGCAGGCGA AACGCCGGGG TATCCTCGCT TTCGGGGGCG TAACCGCTTC GACTCGTTCG GCTTCAAGGA GTATGGGAAC GGCTTCAAAG CGGACGGGAG GCGGCTCCGC TTGTCGGGTA TTGGGCGGGT TGCAGTGCGC TGGAATCGTC CGCTCGAAGG CCAGATCAAG ACCGTTCGCA TTTGGCGCCG CGCCGGGAAG TGGTACGCCT GCTTCGCCTG TGAGACGGAA GCGACTCCGC TGCCAGCGAC CGGGCGCGAG ATTGGCGTGG ACGTAGGCAT TGCGAGTCTG ATCACCACAA GCGAAGGCGC GAAAGAGCCG CACCCCGGCT GGTATCGCGC CGCACAGCGC ATGCTACGCG TGCGGCAGCG ATGCGTCGCC CGCCAGAAGA AGGGAAGCGC GTCCCGGCGC AAGGCCGTGC TGGCGCTGCA GCGCCAGCAC GAGCGGATCG CCAACGCCCG CAAGGACTAT CTGAAAAAGC TAGCGCACCG GCTCATCACG CAGTACGACC GGATCGCGCT TGAAGACCTC CGCATCACGA ACATGGTGCG GAACCGACGC ATGGCAAAGA GTATTCTGGA CGCCGGATGG GGCTGCTTCG TTCGGCGCCT CACGAGCAAA GCGGCTGAGG CTGGCCGTGT GGTGCTGTTG GTGGACCCGA GGAATACGTC CAAGACCTGT AGCCGATGCG GGCATATCTT CGCGACGCTT TCGCTGTCGG ATCGGCGGAT TGATTGCGGC TGCCGACTAT CACTCGATAG AGACCACAAC GCCGCAGTGA ACATCCTAAA ACGGGCTGGA CAAGCCCGTT GGGGCGTAAG CGGGTCACTG GACTCGTTGC CCCAAGAAGC CGCGCCACTT TAG
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Protein sequence | MLKTFVYRLY PSKPQARRLD STLETCRRWY NQCLAERRDA YQQRGETAGK FAQLAKVKEY KALNPHAKGI HSHVLQVVVS DLDKAFQAFF RRVKAGETPG YPRFRGRNRF DSFGFKEYGN GFKADGRRLR LSGIGRVAVR WNRPLEGQIK TVRIWRRAGK WYACFACETE ATPLPATGRE IGVDVGIASL ITTSEGAKEP HPGWYRAAQR MLRVRQRCVA RQKKGSASRR KAVLALQRQH ERIANARKDY LKKLAHRLIT QYDRIALEDL RITNMVRNRR MAKSILDAGW GCFVRRLTSK AAEAGRVVLL VDPRNTSKTC SRCGHIFATL SLSDRRIDCG CRLSLDRDHN AAVNILKRAG QARWGVSGSL DSLPQEAAPL
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