Gene Rcas_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2061 
Symbol 
ID5539541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2642131 
End bp2642859 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content60% 
IMG OID640894197 
ProductFHA domain-containing protein 
Protein accessionYP_001432166 
Protein GI156742037 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.407781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGCAC TCAGTCGCTT CGAAGCGTTC ATGGAGAATA TCGTCGAGGG TTCGGTCGCA 
CGGTTATTCC GCAGCCCAGT GCAACCTGCC GAGATCGCCA AACGCCTCGA ACGCGCGATG
GAAGCCAACC AGACGGTGAG TGTGCGGCGC ATTCTGGTGC CGAACTACTA CCGTGCATTC
CTGAATCCGC AGGACTTTGA GGCATTCAAG CCGATTCGCA CCGAGGTCGA ACGCGAGATG
GCGACCTATC TGGCGGAGCT GGCACAGGAA CGCAGGTTTA GCATGGTCGA ACATCCTCGC
GTCGAACTGG TCGCCGATGC TGGCGTGCCC CGGCGAACGA TCCAGGTCGT GGCGGAAACA
CATGCAGCGC CAGCAGCACC ACATCAGGTT GGCGATACAC AGGTCATTCC GGCACAGGTC
GCAGCGGCGC CAGCGGCGCG TGCCCGCCTG CTGCTGGCAA CTCCCACCGG TACACACGTC
ATCCCGCTCG ATAGCACATC GATGACAATT GGACGCGGAC TGAACAACGA TATCGTTTTG
GAAGACGCGC GCGTCTCACG CAACCACGCT CAATTGCGCT ACAAGTCGCG TCGTTTCTGG
CTGACCGACC TTGGCTCGAC TAATGGCACC TTCGTCAATG GCGAACCGAT AACGGAACGC
GCCCTACGTG ACGGCGATGT CATCTCGCTT GGCGGGCTGG AACTGACGTT TCGCCACATG
GATCGTTGA
 
Protein sequence
MSALSRFEAF MENIVEGSVA RLFRSPVQPA EIAKRLERAM EANQTVSVRR ILVPNYYRAF 
LNPQDFEAFK PIRTEVEREM ATYLAELAQE RRFSMVEHPR VELVADAGVP RRTIQVVAET
HAAPAAPHQV GDTQVIPAQV AAAPAARARL LLATPTGTHV IPLDSTSMTI GRGLNNDIVL
EDARVSRNHA QLRYKSRRFW LTDLGSTNGT FVNGEPITER ALRDGDVISL GGLELTFRHM
DR