Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2041 |
Symbol | |
ID | 5539519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2615887 |
End bp | 2616255 |
Gene Length | 369 bp |
Protein Length | 122 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894176 |
Product | hypothetical protein |
Protein accession | YP_001432147 |
Protein GI | 156742018 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000112803 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTTCG CAGACAAGAC ACTCACCTGT CGGGATTGTG GCGTGGATTT TGTGTTCACC TCCGGTGAGC AGGAGTTTTA CGCGCAGAAG GGATTTACGA ACGAGCCAAC GCGCTGCCCG TCGTGTCGGC AGCAGCGCAA AGGGTCGGGC GGCGGGCGTG GCTACGGCGA GCGCAATGGA TACGGCAGGA ACGACGGTTA TAGCAGCGGG CGCGGCGGTT ATAGCGGCGA ACGTCAGATG CATACCACCA CCTGCGCCGC GTGTGGTCGT GAAGCGCAGG TGCCGTTCGT GCCACGCGGC GATAAGCCGG TCTACTGTTC GGACTGTTTC CAGGATCAGC GCCGCAGCAG CGGGCGCGGT CGCTGGTAG
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Protein sequence | MSFADKTLTC RDCGVDFVFT SGEQEFYAQK GFTNEPTRCP SCRQQRKGSG GGRGYGERNG YGRNDGYSSG RGGYSGERQM HTTTCAACGR EAQVPFVPRG DKPVYCSDCF QDQRRSSGRG RW
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