| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2040 |
|---|
| Symbol | |
|---|
| ID | 5539518 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 2613951 |
|---|
| End bp | 2615237 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640894175 |
|---|
| Product | O-acetylhomoserine/O-acetylserine sulfhydrylase |
|---|
| Protein accession | YP_001432146 |
|---|
| Protein GI | 156742017 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
|---|
| TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0425815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ACATCCGTTT CACCGGCTTC GAGACGCTGG CGCTCCACGC AGGACAGCAA
CCCGACCCTG CCACCGGCGC ACGCGCGGTG CCGATCTATC AGACGACCTC GTATCAGTTC
AAGGATACCG ATCACGCGGC GCGGTTGTTC GGATTGCAGG AATTTGGGAA CATCTACACC
CGCATCATGA ACCCGACGAC CGACGTGCTT GAGCAGCGCA TTGCGGCGCT CGAAGGCGGC
GTCGGCGCGC TGGCGCTCTC ATCGGGGCAG GCGGCGGAGA CGCTGGGTAT CCTGAATGTG
GCAAGCGCCG GCGATAACAT CGTATCGTCG AGCGACCTGT ATGGCGGCAC TTACAATCTC
TTCCGCCATA CATTGCCCAA ACTCGGCATT ACGACGCGCT TCGTCGATGC GCGCGATCAC
GAGGGCTTCC GCAAAGCCAT CGATGATCGC ACCAAACTGG TCTTTCTCGA ACTGGTCGGC
AATCCACGCC TGGATATTGT CGATCTCCAA ACGATTGCCA CTATTGCGCA CGAGCGTGGC
GTGGCGGTGA TGGTCGACTC GACGACGGCA ACCCCCTATT TGTGCCGTCC GTTCGAGTGG
GGCGCCGACA TTGTCATTCA TTCCGGCACG AAGTACCTGG GCGGGCATGG CACGAGCATT
GCCGGTCTGC TGGTCGATAG CGGCAGATTC GACTGGACGA ACGGGCGCTA CCCGGAGTTC
ACCACGCCGG ATCCGTCTTA CCACGGGCTG GTCTACACAC AGGCGTTCGG CAACCTGGCG
TATATTCTGA AAGTGCGGGT GCAGTTGCTG CGCGACATCG GCGCATGCCT CAGCCCGTTC
AATTCTTTCC TGCTCCTTCA GGGTATTGAA ACACTGGGGC TGCGCATGGA GCGCCATAGC
CAGAATGCGC TGGCAGTGGC GCAGTTTCTC AAAGAGCACA GCAAGGTGGA GTGGGTGCTG
TACCCTGGTC TGCCGGACCA CCCCAGTTAT GCCCTGGCGC AGAAATATAT GCCGAAAGGT
CAGAGCGGCA TCCTCGGCTT TGGGATTCGT GGCGGGCGCG CGGCCGGCGC GACGTTTATC
AATAGTCTGC GCCTCTTCTC GCACCTGGCG AATATCGGCG ATGCCAAGAG CCTTGCCATC
CATCCCGCCA GCACGACTCA CAGCCAGTTG ACACCCGAAG AGCAGCGGCT TACCGGCGTC
ACCGACGATT TTGTGCGCCT GTCGGTGGGC ATCGAAACGA TTGACGACAT CATCGCCGAC
CTGGATCAGG CGCTGGCGAA GGTGTAG
|
|---|
| Protein sequence | MSDDIRFTGF ETLALHAGQQ PDPATGARAV PIYQTTSYQF KDTDHAARLF GLQEFGNIYT
RIMNPTTDVL EQRIAALEGG VGALALSSGQ AAETLGILNV ASAGDNIVSS SDLYGGTYNL
FRHTLPKLGI TTRFVDARDH EGFRKAIDDR TKLVFLELVG NPRLDIVDLQ TIATIAHERG
VAVMVDSTTA TPYLCRPFEW GADIVIHSGT KYLGGHGTSI AGLLVDSGRF DWTNGRYPEF
TTPDPSYHGL VYTQAFGNLA YILKVRVQLL RDIGACLSPF NSFLLLQGIE TLGLRMERHS
QNALAVAQFL KEHSKVEWVL YPGLPDHPSY ALAQKYMPKG QSGILGFGIR GGRAAGATFI
NSLRLFSHLA NIGDAKSLAI HPASTTHSQL TPEEQRLTGV TDDFVRLSVG IETIDDIIAD
LDQALAKV
|
|---|
| |