Gene Rcas_2035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2035 
Symbol 
ID5539513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2609200 
End bp2610036 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content57% 
IMG OID640894170 
Producthypothetical protein 
Protein accessionYP_001432141 
Protein GI156742012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAC CCGGCGCGGT CGAACTTCCC GCCTCAAGCA CGCCAAACGC CGCCCGCATT 
TACAGTTACA CGCTGGGTGG TTCATACTAC CTTCAGGTTG ACAAAGCGGC TGCCGAGTAC
ATGTTTTCTC TCGTGCCCTC CACGCCGAAG TGGGTGCGCA TGCTGCGCGC GTTCCTCCAG
CACGCAGCCC GTCGGTTGTG GGCGGAAGGA TTGACCCATT TCGTCGATTT TGCTTCTGGA
CTTCCAACCG ACGATCATAT TCATCACGTG TTGCCGGACG CTCGCATTGT TTACTCGGAC
CTGGACCCCG ACACATATCA ACTGGCGCAG CGGTTGGTCG GGCATCTGCC CAACGTGCTC
TATCTCAAGT GCGATGTGCG TGAGGCGCGT TCGCTGCTTG AGTCGCCGGA GGTGCAGACT
TTTCTGGGTG GTGAGCGGCG AGTTGCGTTC GGTCTGAATG GAATTACAGT GTTCCTCTCC
CCAGAAGAGA TTACACGGCT CTTCCACGAT CTCTACGAGT GGGCGGCGCC GGGTTCCCGC
CTCTATATCA CTTATGAAAC CAAACTGCCA GGGCTGATGA CACCACGGAT GGAACAGTTC
ATCGAGATGT TTCGTCAGGC GGGATCACCC TTCTGGCTGT ATTCGCTCGA GGAATGCATT
GAACTCAGTC GTCCGTGGCA TATCCCGCCG ACGGGATTAA TGCCGTTGCA CCAATTCCTC
GGACTTCCCG ACGACTACGT CACTGAAACT GACCAGGAAG GCGTCGGGTT GCAGTTCTAC
GCTGCGATTC TCGCAAAACC GCTGGAGCAT CCGAAACGAC AGTTTGAACG AGCGTGA
 
Protein sequence
MEQPGAVELP ASSTPNAARI YSYTLGGSYY LQVDKAAAEY MFSLVPSTPK WVRMLRAFLQ 
HAARRLWAEG LTHFVDFASG LPTDDHIHHV LPDARIVYSD LDPDTYQLAQ RLVGHLPNVL
YLKCDVREAR SLLESPEVQT FLGGERRVAF GLNGITVFLS PEEITRLFHD LYEWAAPGSR
LYITYETKLP GLMTPRMEQF IEMFRQAGSP FWLYSLEECI ELSRPWHIPP TGLMPLHQFL
GLPDDYVTET DQEGVGLQFY AAILAKPLEH PKRQFERA