| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2028 |
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| Symbol | |
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| ID | 5539506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2600567 |
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| End bp | 2601625 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894163 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_001432134 |
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| Protein GI | 156742005 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.562802 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTC ATCGCTTTCT GGCGGCGTGT CGCCGCCAGC CAACCGATGC CACGCCGGTC
TGGTTTATGC GCCAGGCAGG GCGCTATATG CCGGAGTATC GCGCGATCCG CGAACGCTAC
GGCTTTCTCG ATATGGTGAA AACGCCGGAA CTGGCTGCCG AGATCACCAT GCAGCCGCTC
CTTGCTTTCC CCGTCGATGC AGCGATCATT TTCGCCGACA TTCTGCCGTT GCTCGAAGGG
ATCGGTCTTC AGTTGACTTA TGAGCAGGGT GAAGGTCCGG TCATTCACAA TCCGTTGCGC
TCCTCCGCCG ACATTGCCGC CCTGCGCGAC GCCGATCCGC GCGAAACGGT CGCGTACACG
ATCCAGGCGA TCCGTTTGGT GAAACGTGAA CTGGAAGAGC GCGCGCCGCT CATTGGGTTC
AGTGGCGCGC CGTTCACGCT GGCGGCGTAT GCCGTCGAGG GAGGATCGTC GCGGGATCAT
CGCTTGACGA AGGCGCTGAT GTATGCCGAA CCGCAGGCAT GGCGCGATCT GATGGAGCGT
TTGACAACCC AGGTGAGCGC CTACCTGATT GCGCAGATTG AGGCTGGCGC CGATGCGGTG
CAGCTCTTCG ATAGTTGGGC AGGCGCACTC GCACCCGGCG ATTATGCCGA ATACGTGCTG
CCGTTTGTGC AGCAATGTAT CATTAATGTG CGCGCCGGTT GTGGGGTCGT TCCGCCGCCG
CCAATTATCT ACTTCGGTGT CGGCATGTCG GGTATGCTCG GTATGTTGCG TCAGACCGAC
GCGGATGTCA TTGGTCTCGA TTGGCGCATC TATCTTGATG ATGGGTGGGC GCAGGTTGGT
CCTGGCGTCG CGGTTCAGGG CAACCTCGAC CCGCACACGC TCCTGGCGCC CTGGTCCGAC
GTCCGTCGTC GCGCCGCCGA TATTCTCGAC CGCGCGGCCA GTCGTCCAGG GCATATTTTC
AACCTGGGGC ACGGGATCGT GCCCGAAACG CCGGTTGATA CTGTGCGTCG TCTGGCTGAG
TTCGTTCATG AGTATTCAGC GGAAGAAACC TATGACTGA
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| Protein sequence | MTLHRFLAAC RRQPTDATPV WFMRQAGRYM PEYRAIRERY GFLDMVKTPE LAAEITMQPL
LAFPVDAAII FADILPLLEG IGLQLTYEQG EGPVIHNPLR SSADIAALRD ADPRETVAYT
IQAIRLVKRE LEERAPLIGF SGAPFTLAAY AVEGGSSRDH RLTKALMYAE PQAWRDLMER
LTTQVSAYLI AQIEAGADAV QLFDSWAGAL APGDYAEYVL PFVQQCIINV RAGCGVVPPP
PIIYFGVGMS GMLGMLRQTD ADVIGLDWRI YLDDGWAQVG PGVAVQGNLD PHTLLAPWSD
VRRRAADILD RAASRPGHIF NLGHGIVPET PVDTVRRLAE FVHEYSAEET YD
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