| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2018 |
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| Symbol | |
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| ID | 5539496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2587963 |
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| End bp | 2589057 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894153 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001432124 |
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| Protein GI | 156741995 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4956] Integral membrane protein (PIN domain superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.625918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATCA GTCTTAATTT TATCGTTCGC CTGATCGGGA TGTTCGCGCT GGGGTATGCA
GGTTTTCGCA TTGGCATCAC GCTATCGGGT GAACCTCCAA CCGAGATTGA GGTCCTGGCG
ACCCAGTTGC TGGCGCTGGC AGGCGCCGGC TTGGGTCTGT TGACCACCCA CCGCTGGACG
GTCGAGCCGG TTCGTGATCT GATTCGTCAT ATGCGAAGCG TCTCGATTGC CGAATTGACG
GCGCTGGTAT TCGGGGCGCT GGTTGGGCTG ATTTTTGGCG TGCTCTTGTC TGTTCCACTG
GCGCAACTGC CGCCGCCGCT CGGTCAGTTT GGTCCAATCG TCGCTGCCGG TGCGCTGGCG
TATCTTGGTG CGATCCTCTT CTCCAACCGT AAGAAAGATA TTGCGGATAT GCTCCTCGCC
TCGCGCCGCG GAACCTTCTC CTGGTCGCAA CAGGTCGGCG ATGCTATCCA GCCGCCGCGT
CGGTATCTGA TTGATACCTC AGCCATTGTT GATGGACGCA TTGCGGCTGT AGCGCAGACG
GGCTTTGTCG ATGGAACATT GGTCGTGCCC GACTTCGTGT TGCACGAGTT GCAATCGCTG
GCGGACTCTG CCGATGAACT GCGGCGGATG AAAGGGCGGC GCGGGCTTGA GATTCTGAAC
ACGATGCAGA AACAAATGAA TAGCGCCGTG GAAGTGCTGA ACGCCGACAT TCCCGGCACT
ATGGACGTGG ACGAGAAACT CGTCATTCTG GCGCGCCAGT ATCGCTGCCC GATTATTACG
AATGATAATA ACCTTGGGCG CGTTGCGGAA CTCCAGGGGG TCAGGGTTCT GAGCCTGAAC
CATCTGGCAG ACGCCGTTCG TCCGCCGGTC ATTCCCGGTC AGGACCTGCG TGTGACAATC
CGCGATATTG GGCGTGAGCG TGAACAGGGG ATTTCGTTTC TGGAAGATGG CACGATGGTG
GTGGTCGAAG ACGCGCGGCG TCTGATTGGG CGCGAGGTGG ATACGATTGT CACGCGCGTC
TATCAGACGC AGACCGGTCG GATCGTGTTT GCACAACTGC GGCTGGAGAA TGTGGTGAAG
CAGGGACCGG TCTGA
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| Protein sequence | MRISLNFIVR LIGMFALGYA GFRIGITLSG EPPTEIEVLA TQLLALAGAG LGLLTTHRWT
VEPVRDLIRH MRSVSIAELT ALVFGALVGL IFGVLLSVPL AQLPPPLGQF GPIVAAGALA
YLGAILFSNR KKDIADMLLA SRRGTFSWSQ QVGDAIQPPR RYLIDTSAIV DGRIAAVAQT
GFVDGTLVVP DFVLHELQSL ADSADELRRM KGRRGLEILN TMQKQMNSAV EVLNADIPGT
MDVDEKLVIL ARQYRCPIIT NDNNLGRVAE LQGVRVLSLN HLADAVRPPV IPGQDLRVTI
RDIGREREQG ISFLEDGTMV VVEDARRLIG REVDTIVTRV YQTQTGRIVF AQLRLENVVK
QGPV
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