| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2015 |
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| Symbol | |
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| ID | 5539493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2582455 |
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| End bp | 2583690 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640894150 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001432121 |
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| Protein GI | 156741992 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0652883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGC AAGAACAGGC TGCCACAAAC CATCAACAGA CGAACGCTGC CCAATCGTTC
GGCGACGCTG CGAATGGCCA GTCAGCCGAT CAGCGTGACG ACCGGGAATT GATGGAGCAG
TTCCTCGCCA ACCCTGCTCA CGACTACCGC AATCTTCAAT ATGGTGATAC GGTCGATGGC
ATCATCATGC GCGTCGGTCG CGATGAGATT CTGGTCGACA TCGGCGCCAA AGCCGAGGGT
GTGGTGCCGG CCAGAGAGAT GCAGTCGCTC TCTGACGATG ATCGAGCGGC GTTGAAACCG
GGCGATCCGC TGCTGGTCTT TGTTGTTCAA TCCGAGGACA AAGAAGGTCG AGCGACGCTC
TCGATCGATC GGGCGCGTCA GGAGAAGAGT TGGCGTCGCT TACAGCAGTG TTATGAGACC
GGCGAGATTA TCGAAGCAAA AGTGATTAAC TACAACAAAG GTGGGCTGCT TGTCAATCTC
GATGGTGTGC GCGGATTTGT GCCTTCCTCG CAGGTCAGCG GCATCGGTCG CGGCTCCGAG
GCGCAGAAGC AGTCGGAGAT GGCGCGCATG GTGGGGCAGA CGCTGGCGTT GAAGGTGATC
GAGATCAATC GTAATCGCAA TCGGTTGATC CTCTCGGAAC GCCAGGCTGC AATGGATGTG
CGCGAAGGGC GCAAAGGTGA GTTGCTGTCG GCGCTGAAAG AAGGCGATGT TCGGGAGGGC
GTCGTCACAT CCGTTTGTGA CTTCGGCGCG TTTGTCGATA TAGGCGGCGC CGATGGGTTG
GTGCATCTTT CGGAACTTTC CTGGAGCCGG GTCAAGCATC CGAGCGAGAT TCTGAAGCCG
GGTGACAAAG TGCAGGTGTA TGTGCTCAGT ATCGATAATG AGCGTAAACG GATTGCGCTC
TCGCTGAAGC GTACCCAGCA CGAGCCGTGG GCCACGGTTG GCGAGCGGTA TCACATTGGC
CAGATGGTTG AGGGTGTCGT GACGCAACTG GCGCCGTTCG GCGCATTCGT GCGGATTGAG
GACGGGGTTG AAGGGCTGAT CCATGTGTCT GAAATGGGTG ATGGACGGGT CCAGCATCCG
CGCGATGTGT TGCAGGAAGG CGATGCGGTC CAGGCACGCA TCATCCGTAT CGATCCGGCG
CGGAAGCGCA TCGGTTTGAG CATGCGCCAG TCATCCGACG ATCAGATCGC GCATCAGTCA
TCCGACAAAG AAGAGGAGTC TGATGCTGAC GAGTGA
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| Protein sequence | MEQQEQAATN HQQTNAAQSF GDAANGQSAD QRDDRELMEQ FLANPAHDYR NLQYGDTVDG
IIMRVGRDEI LVDIGAKAEG VVPAREMQSL SDDDRAALKP GDPLLVFVVQ SEDKEGRATL
SIDRARQEKS WRRLQQCYET GEIIEAKVIN YNKGGLLVNL DGVRGFVPSS QVSGIGRGSE
AQKQSEMARM VGQTLALKVI EINRNRNRLI LSERQAAMDV REGRKGELLS ALKEGDVREG
VVTSVCDFGA FVDIGGADGL VHLSELSWSR VKHPSEILKP GDKVQVYVLS IDNERKRIAL
SLKRTQHEPW ATVGERYHIG QMVEGVVTQL APFGAFVRIE DGVEGLIHVS EMGDGRVQHP
RDVLQEGDAV QARIIRIDPA RKRIGLSMRQ SSDDQIAHQS SDKEEESDAD E
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