Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_2008 |
Symbol | |
ID | 5539486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2575236 |
End bp | 2575796 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640894143 |
Product | hexapaptide repeat-containing transferase |
Protein accession | YP_001432114 |
Protein GI | 156741985 |
COG category | [R] General function prediction only |
COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.500963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTTCA TCCATCCAAC CGCAGAGGTG TCGCCACAGG CGCACATTGG CGACGGGACG CGCGTCTGGC ATGGCGCGCA GATCCGCGAG CGCGCCAGGA TCGGCAGTGG GTGTATCATC GGAAAGAATG TCTATATCGA CTTCGATGTC GTCATTGGCG ATCACGTCAA GATTCAGAAC AATGCGTCGC TCTACCATGG GTTGACCATC GAGGACGGCG TTTTTATTGG ACCGCACGCC ATTTTTACCA ACGATCGCAT TCCGCGCGCT ATCAACCCCG ACGGGTCGCT CAAAGGCGCT TCCGATTGGG TCGTGGGGCG CACTCTGATC CGGCGGGGCG CGTCGATTGG CGCCGGTGTC ATTATCGTGA CAGGCGTAAC CGTCGGTGAG TGGGCATTGT GTGGCGCGGG AGCGGTCGTC ACCTGCGATG TGCCGGCGCA CGCGATTGTT GTCGGCAATC CGGCGCGGGT TATCGGGTAT ATCAGCGCAG GTGGCGCGCG TTGCGCAACA CAGGAGGAAG CTATCGCGCG CACGGTACAG GAACAACAAA CCACTTCGTA G
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Protein sequence | MTFIHPTAEV SPQAHIGDGT RVWHGAQIRE RARIGSGCII GKNVYIDFDV VIGDHVKIQN NASLYHGLTI EDGVFIGPHA IFTNDRIPRA INPDGSLKGA SDWVVGRTLI RRGASIGAGV IIVTGVTVGE WALCGAGAVV TCDVPAHAIV VGNPARVIGY ISAGGARCAT QEEAIARTVQ EQQTTS
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