Gene Rcas_2008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_2008 
Symbol 
ID5539486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2575236 
End bp2575796 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content60% 
IMG OID640894143 
Producthexapaptide repeat-containing transferase 
Protein accessionYP_001432114 
Protein GI156741985 
COG category[R] General function prediction only 
COG ID[COG0110] Acetyltransferase (isoleucine patch superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.500963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTTCA TCCATCCAAC CGCAGAGGTG TCGCCACAGG CGCACATTGG CGACGGGACG 
CGCGTCTGGC ATGGCGCGCA GATCCGCGAG CGCGCCAGGA TCGGCAGTGG GTGTATCATC
GGAAAGAATG TCTATATCGA CTTCGATGTC GTCATTGGCG ATCACGTCAA GATTCAGAAC
AATGCGTCGC TCTACCATGG GTTGACCATC GAGGACGGCG TTTTTATTGG ACCGCACGCC
ATTTTTACCA ACGATCGCAT TCCGCGCGCT ATCAACCCCG ACGGGTCGCT CAAAGGCGCT
TCCGATTGGG TCGTGGGGCG CACTCTGATC CGGCGGGGCG CGTCGATTGG CGCCGGTGTC
ATTATCGTGA CAGGCGTAAC CGTCGGTGAG TGGGCATTGT GTGGCGCGGG AGCGGTCGTC
ACCTGCGATG TGCCGGCGCA CGCGATTGTT GTCGGCAATC CGGCGCGGGT TATCGGGTAT
ATCAGCGCAG GTGGCGCGCG TTGCGCAACA CAGGAGGAAG CTATCGCGCG CACGGTACAG
GAACAACAAA CCACTTCGTA G
 
Protein sequence
MTFIHPTAEV SPQAHIGDGT RVWHGAQIRE RARIGSGCII GKNVYIDFDV VIGDHVKIQN 
NASLYHGLTI EDGVFIGPHA IFTNDRIPRA INPDGSLKGA SDWVVGRTLI RRGASIGAGV
IIVTGVTVGE WALCGAGAVV TCDVPAHAIV VGNPARVIGY ISAGGARCAT QEEAIARTVQ
EQQTTS