| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2001 |
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| Symbol | rplU |
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| ID | 5539479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2570928 |
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| End bp | 2571290 |
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| Gene Length | 363 bp |
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| Protein Length | 120 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894136 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001432107 |
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| Protein GI | 156741978 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0536247 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.99837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGTACGCTA TTGTGCGTGA CCGCGGAATG CAGTACCGCG TCGAAGAGGG GCAGACGCTG
CGCATCGCGC TGCTAGACGC CGAACCGGGG AGTGCCATCG AACTCGGCGA GGTGTTGTTG
ATCGGCGGCG AGATGCCGCT CGTTGGCGCA CCGACGGTCG ATGGCGCAAA AGTCCTGGCG
ACGGTGCTGG GTGAGGAAAA AGGCGACAAG ATCGTGGTAT TTCGCTACAA GAATAAGAAA
CGCTACCGCC GGCGCACCGG TCATCGGCAG GAGTATACCC GCGTGTCGAT CGATAAAATC
GTTGTCGGCG CCAATGAGCA GCACGTGACG AACACACCGG AAGGAGAAAC CAATGGCGCA
TAA
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| Protein sequence | MYAIVRDRGM QYRVEEGQTL RIALLDAEPG SAIELGEVLL IGGEMPLVGA PTVDGAKVLA
TVLGEEKGDK IVVFRYKNKK RYRRRTGHRQ EYTRVSIDKI VVGANEQHVT NTPEGETNGA
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