| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1965 |
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| Symbol | |
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| ID | 5539443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2515520 |
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| End bp | 2517169 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640894100 |
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| Product | YidE/YbjL duplication |
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| Protein accession | YP_001432071 |
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| Protein GI | 156741942 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2985] Predicted permease |
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| TIGRFAM ID | [TIGR01625] AspT/YidE/YbjL antiporter duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.103303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTGGT TCGTCGAACT ACTGAAGAGC AATACGCTCC TGCTCCTCTT TCTGGTGGCG
GCGATCGGCT ATCCGCTCGG TCGCCTCCGA TTGTTCGGGC ACCGCCTCGG CGTTGCCGCC
GTGCTCTTCG CCGGTCTGGC GATCGGTGCG CTTGACCCGG ACCTCAAATT GCCGGAGGTC
GTCTACACCC TCGGACTGGT CGTATTCGTC TACACCATCG GGCTGAGCAG CGGCGCCGGA
TTTTTTGCCT CGTTCCAGCA CAAAGGGCTG CGTGATAACC TGTTAATCGT CGGCATACTG
ATCGTCGCTG CCCTGGCCGT CGCCGGCGTC CAGTATGCCT TCGGACTACG CCCAACTCTC
GCTGCCGGAC TGTTCGCCGG AAGCCTGACC AACACGCCAG CGCTGGCTGC GGTGCTGGAG
CAGATCAAAA CCACCGCCCC CGCCGATATA CGCGATCAAC TGCTGACCGA CCCGGTCATC
GGGTATTCGA TTGCCTACCC GATCGGCGTG ATTGGGATGA TCGGCACGAT TGCCGCACTT
CAGCGCGCCT GGCATGTAGA TTATACCAGC GAAACGCCGG CTCTGCGCGA TCTCGGCGCC
GTGGGGCAAA AACTGGTTAA CCGCACCGTG CGCATTACAC GCCCGGAAAT CAGTCTGCTA
ACCGTCGACG AACTGCTGCG CGCCAAGCAG TGGCGGATTA TCTTCGGCAG AACACGGCGC
AACGGTCAGA TGACGCTGGT GGACGGCGCC ACCCATCTTC AGCAGGGCGA CCTGGTCAGT
CTCATCGGCA CAGAGGAAGA GATCACCGAA GCTGCCGCAT TCCTCGGTGA GATGACGGAT
GAACGCTTAG AACTCGACCG CAGCACGCTC GACTTCCGAC GCATCTTCGT GTCCAACCCA
CAGGTCGTCG GGCGACCGCT GCGCGCATTA CGGTTGCCGC AACGCTTCGG CGCGCTGGTG
ACGCGCGTGC GCCGTGGCGA TATGGAACTG CTGCCCCACG GCGATATGGT GCTGGAACTC
GGCGACCGGG TGCGCGTCGT GGCGCTGCGC GAGCGCATGG ACGAGGTGAG CGAGTTCTTT
GGCGACTCGT ATCGCGCCCT CAGTGAGATC GACATCCTCA CCTTCAGCCT GGGGCTGGCG
ATGGGGCTGT TGATCGGCAT GATCCCCATT CCGCTTCCCG GCGGTGCGAC TTTTCGCCTC
GGCGTCGCCG GGGGACCGCT GGTGATGGCG CTGATCCTGG GCGCGCGCGA ACGCACCGGA
CCACTGGTGT GGAACATTCC ATACAGCGCC AACCTGACCC TGCGCCAGAT TGGGTTGGTG
TTATTCCTGG CAGGCGTCGG CACACGATCT GGCTATGCGT TCGTCAGCAC CTTCTCCCAA
AGCGGCGGAA TCGTGCTGTT GGTCACCGGC GCGGTCATCA CCTGTGGCGT GGCATTCCTG
ACGCTGTGGA TCGGACACAA ATTGCTGCGC ATTCCGATGA GCCTGTTGAT CGGAATGCTC
GCAGGCTTAC AGACCCAACC CGCAGTCCTT GCATTTGCGC TGGAACAGAC GAAGAACGAT
GCGCCGAACA TTGGCTACAC CACGGTCTAC CTGATGGCGA TGATTGCCAA GATTCTGCTG
GCGCAGGCGC TTGTGCTCTT TCTCCAGTAA
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| Protein sequence | MSWFVELLKS NTLLLLFLVA AIGYPLGRLR LFGHRLGVAA VLFAGLAIGA LDPDLKLPEV
VYTLGLVVFV YTIGLSSGAG FFASFQHKGL RDNLLIVGIL IVAALAVAGV QYAFGLRPTL
AAGLFAGSLT NTPALAAVLE QIKTTAPADI RDQLLTDPVI GYSIAYPIGV IGMIGTIAAL
QRAWHVDYTS ETPALRDLGA VGQKLVNRTV RITRPEISLL TVDELLRAKQ WRIIFGRTRR
NGQMTLVDGA THLQQGDLVS LIGTEEEITE AAAFLGEMTD ERLELDRSTL DFRRIFVSNP
QVVGRPLRAL RLPQRFGALV TRVRRGDMEL LPHGDMVLEL GDRVRVVALR ERMDEVSEFF
GDSYRALSEI DILTFSLGLA MGLLIGMIPI PLPGGATFRL GVAGGPLVMA LILGARERTG
PLVWNIPYSA NLTLRQIGLV LFLAGVGTRS GYAFVSTFSQ SGGIVLLVTG AVITCGVAFL
TLWIGHKLLR IPMSLLIGML AGLQTQPAVL AFALEQTKND APNIGYTTVY LMAMIAKILL
AQALVLFLQ
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