Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1933 |
Symbol | |
ID | 5539411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2474939 |
End bp | 2475676 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640894069 |
Product | O-methyltransferase family protein |
Protein accession | YP_001432040 |
Protein GI | 156741911 |
COG category | [R] General function prediction only |
COG ID | [COG4122] Predicted O-methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.744837 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000011489 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAGGGT CATGGCATTC CCGTCCCCCT GTGGGCGCCC AACAAGGATG GCAGGATCTC CATCAGGAGG ACAGCATGCA CAAGCAGTGG GCTGCCGTCG ATGACTACAT AGCCGGTCTG TTTCCGTCGG ACCCGGTGCT CGACGCTGTG CTGCGCGCAA CGCGCGACGC CGGGATGCCG CAGATCAATG TCTCGCCGGT TCAAGGGCGA TTGCTGCACG TTCTGGCGCT GGCATGCAAC GCAAGAAACA TCCTGGAAAT CGGAACGCTG GCGGGCTATA GCGCGATCTG GATGGCGCGC GCGCTGCCAG CCGATGGAAA ACTGATCTCG CTGGAGTTCG ATCCGAAACA CGCCGATGTT GCGCGCGCCA ACATTGTGCG TGCTGGTCTT GCCGACCGCG TGGACGTGCG TCTGGGAACG GCGTTGGACA TCCTGCCGCA GTTGGCGGCG GAGGGCGCAG GACCGTTCGA CCTGATCTTT ATCGATGCCG ACAAGATCAA TCTGACGACT TACTTCGATT GGGCGGTGTG CCTGGCGCGT CCCGGCAGCC TGATTGTCGT CGATAATGTC ATCCGTGGCG GCGACGTGCT GGATGCTGCG AGCGACGATG CCGGGTTGCA GGGGGTGCGC CGCTTCAACG AGGCGATTGC CGCCGATCCG CGCGTGACGG CGACGATCCT GCAAATGGTC GGCAGCAAGG GGCACGATGG GCTGGCGCTG GCCGTGGTGA GGGGGTAA
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Protein sequence | MAGSWHSRPP VGAQQGWQDL HQEDSMHKQW AAVDDYIAGL FPSDPVLDAV LRATRDAGMP QINVSPVQGR LLHVLALACN ARNILEIGTL AGYSAIWMAR ALPADGKLIS LEFDPKHADV ARANIVRAGL ADRVDVRLGT ALDILPQLAA EGAGPFDLIF IDADKINLTT YFDWAVCLAR PGSLIVVDNV IRGGDVLDAA SDDAGLQGVR RFNEAIAADP RVTATILQMV GSKGHDGLAL AVVRG
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