Gene Rcas_1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1933 
Symbol 
ID5539411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2474939 
End bp2475676 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content63% 
IMG OID640894069 
ProductO-methyltransferase family protein 
Protein accessionYP_001432040 
Protein GI156741911 
COG category[R] General function prediction only 
COG ID[COG4122] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.744837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000011489 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAGGGT CATGGCATTC CCGTCCCCCT GTGGGCGCCC AACAAGGATG GCAGGATCTC 
CATCAGGAGG ACAGCATGCA CAAGCAGTGG GCTGCCGTCG ATGACTACAT AGCCGGTCTG
TTTCCGTCGG ACCCGGTGCT CGACGCTGTG CTGCGCGCAA CGCGCGACGC CGGGATGCCG
CAGATCAATG TCTCGCCGGT TCAAGGGCGA TTGCTGCACG TTCTGGCGCT GGCATGCAAC
GCAAGAAACA TCCTGGAAAT CGGAACGCTG GCGGGCTATA GCGCGATCTG GATGGCGCGC
GCGCTGCCAG CCGATGGAAA ACTGATCTCG CTGGAGTTCG ATCCGAAACA CGCCGATGTT
GCGCGCGCCA ACATTGTGCG TGCTGGTCTT GCCGACCGCG TGGACGTGCG TCTGGGAACG
GCGTTGGACA TCCTGCCGCA GTTGGCGGCG GAGGGCGCAG GACCGTTCGA CCTGATCTTT
ATCGATGCCG ACAAGATCAA TCTGACGACT TACTTCGATT GGGCGGTGTG CCTGGCGCGT
CCCGGCAGCC TGATTGTCGT CGATAATGTC ATCCGTGGCG GCGACGTGCT GGATGCTGCG
AGCGACGATG CCGGGTTGCA GGGGGTGCGC CGCTTCAACG AGGCGATTGC CGCCGATCCG
CGCGTGACGG CGACGATCCT GCAAATGGTC GGCAGCAAGG GGCACGATGG GCTGGCGCTG
GCCGTGGTGA GGGGGTAA
 
Protein sequence
MAGSWHSRPP VGAQQGWQDL HQEDSMHKQW AAVDDYIAGL FPSDPVLDAV LRATRDAGMP 
QINVSPVQGR LLHVLALACN ARNILEIGTL AGYSAIWMAR ALPADGKLIS LEFDPKHADV
ARANIVRAGL ADRVDVRLGT ALDILPQLAA EGAGPFDLIF IDADKINLTT YFDWAVCLAR
PGSLIVVDNV IRGGDVLDAA SDDAGLQGVR RFNEAIAADP RVTATILQMV GSKGHDGLAL
AVVRG