| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1932 |
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| Symbol | |
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| ID | 5539410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2473023 |
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| End bp | 2474318 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640894068 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001432039 |
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| Protein GI | 156741910 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.536159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000905056 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGATCC AGTACGATAT TGGTCTTTCC ACCCACACCC GCCAGCACAT CCGCTTGCCT
GAACCGCTCC GCTTCCCGCC AGGCTTTCTA TGGGGAACCG CCACCAGCGC GCATCAGGTT
GAAGGGCAGA ATACCAATAA CCAGTGGTGG GTTTGGGAGC AGCAAGGGCG CTGTTGGCAT
GGTGACGTTT CCGGTGATGC CTGTGGTTGG TGGCGCGACG CTGAAGGCGA CCTGGATCGA
GCCGCTGCGC TTGGCACAAA CGCCCATCGT ATGTCTATCG AATGGAGTCG CATCGAGCCG
GAAGAAGGAC GCTTCGACCG TCGCGCGATC CGCCGCTATC GCAACATCAT CGGCGGCATC
ATCAGGCGCG GGATGACGCC GATGATTACG CTCCACCATT TCACCAATCC GCTCTGGATC
GAGGCGCGAG GCGCATGGTT GAACCCGGCA ACGCCCAGAC GGTTTGCGCA ATTCGTCGCG
TATGCAGTCG AAGAATTGGG CGATCTCTGT AATCTCTGGT GCACCGTCAA CGAACCGACG
GTCTACGCGG CGTTGAGTTA TCTCCAGGGT GTCTGGCCCC CTGGACGGCG CAATATTATC
CAGGCGTTGC GGGTCTTCGC CAATTTGATG CGCGGGCACG AACTAGCGGC GCAGACGGTG
CGCAAGCAGC ATCCGGCGCA CCGTGTTGGC ATTGTGCATC ACAAGCGGGT CCTTGATCCG
GCTTCGCCTG CCGGTCACGA TGTGCTGACG ACGGTGATGT ATGATTATCT GGTCAATGGA
CTGGTGTTGC GGCGGCTGCG CGAAACGTCC GATTTCTTCG GGCTGAATTA CTATAGCCGC
GATCACATCG CCTTTGACCT GCGCCGTCCG TACCATCTGT TCATTCGCCG CTTCACGCCG
CCGCACTTTG AGCAGAGCGA CGCGGGCATG GAGGGCGCGT TTGGCGAAAT CTATCCCAAC
GGTCTGTACC GCGCGCTCAA ACGGGTCTAC CGCTGGCTGA AACTACCGAT CTATGTGACC
GAAACCGGTC TGCCGGATGC GGACGATAAT CAGCGCCCGC GCTTTCTGCT CAATCACCTG
GAATCGGTGC ATCGCGCGAT CCAGGAGGGT GTCGATGTGC GTGGCGTCTT CGTCTGGTCG
CTGGTGGATA ATTTTGAGTG GGCAGAGGGA TGGGGGCTGC GCTTCGGACT GTATGCGCTC
GATGAGCGCA CCGGTGAGCG GCGGATGCGT CCTTCCGCTG CGCTCTACGC GATCATCACC
CGCGCAAATG CGATTCCTGC GCCGGGGGCG TTGTGA
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| Protein sequence | MTIQYDIGLS THTRQHIRLP EPLRFPPGFL WGTATSAHQV EGQNTNNQWW VWEQQGRCWH
GDVSGDACGW WRDAEGDLDR AAALGTNAHR MSIEWSRIEP EEGRFDRRAI RRYRNIIGGI
IRRGMTPMIT LHHFTNPLWI EARGAWLNPA TPRRFAQFVA YAVEELGDLC NLWCTVNEPT
VYAALSYLQG VWPPGRRNII QALRVFANLM RGHELAAQTV RKQHPAHRVG IVHHKRVLDP
ASPAGHDVLT TVMYDYLVNG LVLRRLRETS DFFGLNYYSR DHIAFDLRRP YHLFIRRFTP
PHFEQSDAGM EGAFGEIYPN GLYRALKRVY RWLKLPIYVT ETGLPDADDN QRPRFLLNHL
ESVHRAIQEG VDVRGVFVWS LVDNFEWAEG WGLRFGLYAL DERTGERRMR PSAALYAIIT
RANAIPAPGA L
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