| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1896 |
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| Symbol | |
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| ID | 5539374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2437646 |
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| End bp | 2438359 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640894033 |
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| Product | ABC transporter related |
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| Protein accession | YP_001432004 |
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| Protein GI | 156741875 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.02479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACTTC TCGAACTCAA AAACGTCCAT ACGTACTACG GCAATATCCA TGCGCTTAAG
GGTATCTCCC TCGTTGTGGA AGAGGGTGAG ATCGTGACGC TGATCGGCTC GAATGGGGCC
GGCAAGAGCA CGACGCTGCG CACGATCTCA GGTCTATTGA AACCCAGGCA AGGCGAGATC
CTCTTCAAGG GCGAACGGAT TGATCACCTG CCGCCGCACA AGATTGTCGA GATGGGAGTC
ATTCAGGCGC CGGAAGGGCG CCGCATCTTT CCACGCCTGA CGGTGCGCGA GAACCTGGAG
ATCGGCGCCT TTCTCCGCAA GGATAAAGCC GAGATCGCCA GGGATATGGA ACGAGTGTTC
CAACTCTTTC CGCGTTTGTA CGAGCGCCTC AACCAGCGCG GCGGTACGCT CTCTGGCGGT
GAACAGCAGA TGTTGGCAAT CGGGCGGGCA TTGATGGGCC GTCCGCGTGT GCTCCTCCTC
GACGAACCGT CGATGGGTCT CGCGCCGGTG CTGGTCGAGC AGATCTTCAG CATCATCGGC
GACATCAATG CCCAGGGCAC GACGATCCTG CTCGTCGAGC AGAATGCGCT GATGGCGCTG
GCAATCGCTC ATCGCGGCTA TGTGCTCCAG ACCGGGGAGA TTGTGCTGGC AGACACTGCC
CATGCGCTAC GTGAAAATAA ACTCGTCCAG CACGCCTATC TTGGCGTCGG GTAA
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| Protein sequence | MPLLELKNVH TYYGNIHALK GISLVVEEGE IVTLIGSNGA GKSTTLRTIS GLLKPRQGEI
LFKGERIDHL PPHKIVEMGV IQAPEGRRIF PRLTVRENLE IGAFLRKDKA EIARDMERVF
QLFPRLYERL NQRGGTLSGG EQQMLAIGRA LMGRPRVLLL DEPSMGLAPV LVEQIFSIIG
DINAQGTTIL LVEQNALMAL AIAHRGYVLQ TGEIVLADTA HALRENKLVQ HAYLGVG
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