| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1894 |
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| Symbol | |
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| ID | 5539372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2435250 |
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| End bp | 2436614 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640894031 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001432002 |
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| Protein GI | 156741873 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.735841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0546266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCGG ACAATCGACA GGTCGGTCAA TCTGCATCGC TCTGGGCGCA ACTTCGCGCG
GTGGCGGGGC GCGGTCCTGC GCCATATGCG CTGATCCTGG CGTATGCCGC AGTGGTGTCG
GCGCTGCTGC TCCTCAACCC GACGACCGGC CTTGGCACTG ATATGGTCGT CGTTCTGTTT
TTGCTGTTGA TGTTCATTAT CTATCGCGCG CCGACGATGC TGGCGTTCAA GTTGACGCTC
GGAACGATCC TGCTCGCGGT TGTGATGCCG GTCTTTGGGG TGCTCAACCC GTTCTACATC
GATGTCGTCA CCAAAGCTGG CATGTTCGCG GCGCTGGCGC TCGGCTTGAA TGTGGTGGTC
GGGTTTGCCG GTCTGCTCGA CCTGGGGTAT GTGGCGTTCT TCGCCGTCGG CGCGTATCTG
TGGGGCATCT TTAGCACGCC GCAAATCTCC AACATCGTTC CGGGGATGGA ACCGCTGCAC
GGATCGTGGT TCTGGCTCTT TCTGGCAATC GGGCTGGCGG TCGGCGCATT TTTTGGCGTG
CTCCTCGGTC TGCCGGTGCT GCGGCTGCGC GGCGACTATC TGGCGATCGT CACGCTGGGG
TTGGGTGAAG TCATTCGTGT GCTGGCAACG AACCTCGACC GTCCGATCAA TATCACGAAT
GGCGCGCAGG GCATTAAGGA CGTGGGACGT CCACCGTTGT TCGTCGAGCC GGTCTTCCAG
GCGCTGGGGA TGACGATCTC GCGGGTGCAG GAGTATCAAC TCTATTTCTA TTTTCTGGTG
TTGCTGGTGC TCGCGCTCAC GGTCTTCGTC GTTCACCGCC TGAACGATTC GCGCATTGGG
CGCGCATGGA CGGCTATTCG CGAGGATGAA ACCGCTGCGA TTGCCATGGG CATTCCGCTC
GTGCGCATGA AACTGCTGGC GTTCGCCGTC GGCGCGTCGT TCGCCGGGAC GATGGGGGTG
ATCTTTAGCG CGCTGCAAAC GTTCATCAAT CCGCCGACGT TCGATCTGTT GCGCTCGATC
GGCATTCTGT CGATGGTCAT TCTCGGCGGG ATGGGGAGCA TCCCCGGCAC GATGCTCGGC
GCAGTGATTG TCACGCTGCT CGATCTGCAA CTGCTGCCGC GGATCGCCGG CGAACTGGCG
GCGCTCCAGC GGCGCGGCGT GCCGATCCCA TCGTGGTTCG ACCCGGCGCA GTATCAGCGC
CTGCTCTTCG GGTTGCTGCT CGTAATCATG ATGATTTTCC GACCCGAGGG TTTGCTGCCG
GAGGATCGTC GCCGCCAGGA GTTGCACCAC GATGAGCCTG AACCGGCCCC TGAGTCAAAG
ACGTCCTCTG CGGTTCCAGA GTCTGCACAA AGCGTTGAAG GTTGA
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| Protein sequence | MTADNRQVGQ SASLWAQLRA VAGRGPAPYA LILAYAAVVS ALLLLNPTTG LGTDMVVVLF
LLLMFIIYRA PTMLAFKLTL GTILLAVVMP VFGVLNPFYI DVVTKAGMFA ALALGLNVVV
GFAGLLDLGY VAFFAVGAYL WGIFSTPQIS NIVPGMEPLH GSWFWLFLAI GLAVGAFFGV
LLGLPVLRLR GDYLAIVTLG LGEVIRVLAT NLDRPINITN GAQGIKDVGR PPLFVEPVFQ
ALGMTISRVQ EYQLYFYFLV LLVLALTVFV VHRLNDSRIG RAWTAIREDE TAAIAMGIPL
VRMKLLAFAV GASFAGTMGV IFSALQTFIN PPTFDLLRSI GILSMVILGG MGSIPGTMLG
AVIVTLLDLQ LLPRIAGELA ALQRRGVPIP SWFDPAQYQR LLFGLLLVIM MIFRPEGLLP
EDRRRQELHH DEPEPAPESK TSSAVPESAQ SVEG
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