| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1880 |
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| Symbol | |
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| ID | 5539358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2414409 |
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| End bp | 2415359 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640894017 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001431988 |
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| Protein GI | 156741859 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.2607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAACCA CATCTGTGTC TGTCGATCAG CAGCGCGCAG CCGACCGCCG TTCTACGCTG
CGCGAGATGA AACGCAACGC CTGGGCGTAT GTCTTTATCT CGCCCTTCTA TATTCTCTAT
GCCGTCTTTG GCATGTTTCC CCTGCTGTAT GGCGTGTGGC TGAGTTTCTT CAAATGGGAC
GGCATTTCGC CGATGCAGTG GATCGGCTTG CGGAACTATA CACGCCTGTT TGCCGACGAT
ATCTGGTGGT ATGCGGTTTA TAACACCATC TGGCTGTTTT TTGGCGCAAC AGTGCCGCAA
TTGACGATTG CTCTGATTCT TGCGTTCATC ATCAACAGTA ACTATATTCG CGGCAAGGAT
ATTTATCGGG CAGCATTCTT TTCGCCATTC GTCGCTTCTT CGGTGGCGAT CAGTATTGTG
TTTCTGTCGA TCTTTGGCTC CCGCTACGGT TTGCTCAACT ATGCGCTCAG TTTCGTCGGT
CTCGGTCCGA TCCGCTGGCT CGAAGACGCT GCGTGGATTA AGCCTTCCAT TGCGATGGTG
ATTATCTGGC AGTGGACGGG GTACAGCATG ATCATCTTCC TTGCCGGTCT TCAGTCGATC
AACACGGAAT TGTACGAAGC GGCAAAAGTT GATGGCGCGC GCACGCGCGA TGTCTTCTGG
CACATTACTA TGCCGCTGAT GCGACCGGTC ATTCTCTTTC AGGTCATTCT GTCGATCATT
GGCGCCATGC AGAACTTCGA TATTCCGGTG ATGCTGGCGG GCGGCACGCA ATCGTCGTCG
CCGGGAGGCA CCGACCGCGC CGGGTTGGTG GCGATGGTGC AGTTGTACTG GACGGCGTTC
AAATATGGTG ATTTTGGCTA TGCTGCGGCA ATGGCGCTGA TCCTCTTCTT CCTGATCCTG
ATCTTCAGCG TCGCCTATAA TCGCTGGCAG GGTCGCAGCC CGACCGATTG A
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| Protein sequence | MATTSVSVDQ QRAADRRSTL REMKRNAWAY VFISPFYILY AVFGMFPLLY GVWLSFFKWD
GISPMQWIGL RNYTRLFADD IWWYAVYNTI WLFFGATVPQ LTIALILAFI INSNYIRGKD
IYRAAFFSPF VASSVAISIV FLSIFGSRYG LLNYALSFVG LGPIRWLEDA AWIKPSIAMV
IIWQWTGYSM IIFLAGLQSI NTELYEAAKV DGARTRDVFW HITMPLMRPV ILFQVILSII
GAMQNFDIPV MLAGGTQSSS PGGTDRAGLV AMVQLYWTAF KYGDFGYAAA MALILFFLIL
IFSVAYNRWQ GRSPTD
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