Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1857 |
Symbol | |
ID | 5539335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2371496 |
End bp | 2372104 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640893995 |
Product | hypothetical protein |
Protein accession | YP_001431966 |
Protein GI | 156741837 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.39074 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATCG TGCATGCCGG TCCTGATCGC GTGCTGCGAT CGCTGCGCGC CGACTGGAGC CGTGAGCGCT GGGAACAGCT TCCCAATGAC GGCAATCGCT ATGAGGTGAT CGATGGGATT CTGTATATGA CGACCGCGCC CAGCGCATTT CACCAGTGGA TTGTTCGCCA GATTGTGCGC GCGCTCTTTG CTCAGATTGA CGATCTAAAC CTCGGCGTCA CCCTGTGGGC GCCGATCGGG GTTTTTATGC CCGGCTGTGA TCCGGTGCAG CCGGATATTC TTGTTGTTCA GACGGCGCAC CTGGGCATCA TCCATGATCG GCGCATCTAT GGCGTGCCAG ACCTCATCGT GGAGGTTGTT TCGCCATCGA ACTCTGAGCA GGACCTTGAT ATTAAGCGCA AAGCATATGC GCGCGCAGCC GTGCCGGAAT ACTGGATTGT TCGCCCTGCC GAACGCGATG CGCTGGTGTG CAGCGAGCCA GACCCTGTGG CTGAACTTTT CCAGACCGTC GATACCATTC CGCCAACCGG AGTCCTGGCT TCCCCAACGT TGCCGATCCA GGCGAGCATT GCCGATTTCT TCGCCAACGC CCCCGATGCT ACGCTCTAA
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Protein sequence | MTIVHAGPDR VLRSLRADWS RERWEQLPND GNRYEVIDGI LYMTTAPSAF HQWIVRQIVR ALFAQIDDLN LGVTLWAPIG VFMPGCDPVQ PDILVVQTAH LGIIHDRRIY GVPDLIVEVV SPSNSEQDLD IKRKAYARAA VPEYWIVRPA ERDALVCSEP DPVAELFQTV DTIPPTGVLA SPTLPIQASI ADFFANAPDA TL
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