Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1833 |
Symbol | |
ID | 5539311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 2341366 |
End bp | 2341923 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893971 |
Product | hypothetical protein |
Protein accession | YP_001431942 |
Protein GI | 156741813 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTATTG CGCCCGCTCA ACTGATGACC GCTGAGTCGT TCTGGTTGTT GCCGGAAGGA CCGATACGGC GCGCCCTGGT GCGCGGGGAG GTTGTCGAAA CCATGCCCCT AGGTGGACGA CACGGGATGC TTGCACTCCG CATTGGCGCG CGATTGCAGC AATGGGCGGA AGCCGGCGGT CACGGAGTGG TCTGTGTTGA GTCCGGGTTT GTGCTTGCGC GCAACCCCGA TACGGTGCGC GCTCCTGATG TCGCCTTTGT CGCAGCGGCG CATATTCCGG TGACCGGTGT TCCCGACGGA TTTTGGGAGC AGGCGCCCGA TCTGGCAGTC GAGATCGTTT CCCCATCCGA GACCGCCGGG GACGCGCGCG AAAAGGTGCG CGATTTTCTC TCCGCCGGCG CCCGTCTGGT CTGGGAAGTC CACCCACGCA CCCACGAAGT GCTCGTGCAT CGAGCCGAAG GTTCGATTCA GGCGCTTTCT GGCGATGATC TTCTGCAAGA CCCGGATGTG CTTCCCGCGT TTAGTTGCCG CGTAGCGGAC ATTTTTGCGC CATACTGA
|
Protein sequence | MSIAPAQLMT AESFWLLPEG PIRRALVRGE VVETMPLGGR HGMLALRIGA RLQQWAEAGG HGVVCVESGF VLARNPDTVR APDVAFVAAA HIPVTGVPDG FWEQAPDLAV EIVSPSETAG DAREKVRDFL SAGARLVWEV HPRTHEVLVH RAEGSIQALS GDDLLQDPDV LPAFSCRVAD IFAPY
|
| |