Gene Rcas_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1833 
Symbol 
ID5539311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2341366 
End bp2341923 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content62% 
IMG OID640893971 
Producthypothetical protein 
Protein accessionYP_001431942 
Protein GI156741813 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTG CGCCCGCTCA ACTGATGACC GCTGAGTCGT TCTGGTTGTT GCCGGAAGGA 
CCGATACGGC GCGCCCTGGT GCGCGGGGAG GTTGTCGAAA CCATGCCCCT AGGTGGACGA
CACGGGATGC TTGCACTCCG CATTGGCGCG CGATTGCAGC AATGGGCGGA AGCCGGCGGT
CACGGAGTGG TCTGTGTTGA GTCCGGGTTT GTGCTTGCGC GCAACCCCGA TACGGTGCGC
GCTCCTGATG TCGCCTTTGT CGCAGCGGCG CATATTCCGG TGACCGGTGT TCCCGACGGA
TTTTGGGAGC AGGCGCCCGA TCTGGCAGTC GAGATCGTTT CCCCATCCGA GACCGCCGGG
GACGCGCGCG AAAAGGTGCG CGATTTTCTC TCCGCCGGCG CCCGTCTGGT CTGGGAAGTC
CACCCACGCA CCCACGAAGT GCTCGTGCAT CGAGCCGAAG GTTCGATTCA GGCGCTTTCT
GGCGATGATC TTCTGCAAGA CCCGGATGTG CTTCCCGCGT TTAGTTGCCG CGTAGCGGAC
ATTTTTGCGC CATACTGA
 
Protein sequence
MSIAPAQLMT AESFWLLPEG PIRRALVRGE VVETMPLGGR HGMLALRIGA RLQQWAEAGG 
HGVVCVESGF VLARNPDTVR APDVAFVAAA HIPVTGVPDG FWEQAPDLAV EIVSPSETAG
DAREKVRDFL SAGARLVWEV HPRTHEVLVH RAEGSIQALS GDDLLQDPDV LPAFSCRVAD
IFAPY