| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1832 |
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| Symbol | |
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| ID | 5539310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2340343 |
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| End bp | 2341350 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893970 |
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| Product | ABC transporter related |
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| Protein accession | YP_001431941 |
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| Protein GI | 156741812 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4586] ABC-type uncharacterized transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.476025 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTTA TCGATGTAGC CGATCTCACC AAAGTCTTCC GTGTTGTGGT GCGTCAGAGC
GGGCGTTTCA GCGCGTTGCG CACCTTCCTG AGCCGTGAGT ACCGTGATGT GTGTGCTGTC
GATCATGTCT CGTTCGCTAT CGAGGCTGGC GAAATGGTCG GTTATCTGGG ACCGAACGGC
GCGGGCAAAT CGACGACATT GAAGATGCTG ACCGGCATTC TTGCGCCGAC GTCCGGGCAT
CTATCGATCG ATGGGCGCGA GCCGCAGCGC CAACGCATCG AACACGCGCG TCGAATCGGC
GTTGTGTTTG GCCAGCGCAC CCAGCTCTGG TGGGATCTGC CGGTGATAGA GTCGTTCGAG
TTGCTGCGGT ATATCTATCG TATCCCGCTG GAACGCTGGA AGGCGAACCT GTCCACCTTC
GACGATCTGC TCGATCTCGG TGCGTTCCTC AACACGCCGG TGCGCCAGAT TTCGCTAGGG
CAACGCATGC GCGCCGAACT TGCTGCTGCG CTGCTGCACG ACCCGGCAAT TCTCTTTCTC
GACGAACCAA CCATTGGGCT GGATGTGATT GCCCGTGAGC GCATCCGTCA ATTTCTCGAG
CGCATCAACC ATGAATGCGG CGTGACCATC ATTCTGACCA CTCACGACCT GAATGATATT
CAACGTCTCT GTCGGCGCGT CATTCTGATC GATCACGGAC GTGTAATCTA CGACGGGGCG
CTGGAGACAT TGCGCGAGCG ATTCGGTCGC TGGCGCATCC TGATCGTCGA TCTGGAACGC
GACGACGCGC TTGATGATAC CCTGGAGGCG CCCGGCGCTG AAGTGATCGA ACGCTATGGA
ACTCGCTTCC GGTTGCGCTT CGATCGGAGC GCGACGACCG CCGCTGCGCT GATCGCATAC
CTGAGCAGCC GGTATCCGAT CCGTGATCTG GCGATCGAGG AACCGGAGAT TGAAAGTGTC
ATCCGGCGCA TTTACGAGGC GCCGGAGGTT GCGCGGTTGC ATGCGTGA
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| Protein sequence | MPLIDVADLT KVFRVVVRQS GRFSALRTFL SREYRDVCAV DHVSFAIEAG EMVGYLGPNG
AGKSTTLKML TGILAPTSGH LSIDGREPQR QRIEHARRIG VVFGQRTQLW WDLPVIESFE
LLRYIYRIPL ERWKANLSTF DDLLDLGAFL NTPVRQISLG QRMRAELAAA LLHDPAILFL
DEPTIGLDVI ARERIRQFLE RINHECGVTI ILTTHDLNDI QRLCRRVILI DHGRVIYDGA
LETLRERFGR WRILIVDLER DDALDDTLEA PGAEVIERYG TRFRLRFDRS ATTAAALIAY
LSSRYPIRDL AIEEPEIESV IRRIYEAPEV ARLHA
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