| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1823 |
|---|
| Symbol | |
|---|
| ID | 5539301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 2331856 |
|---|
| End bp | 2332902 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640893961 |
|---|
| Product | agmatine deiminase |
|---|
| Protein accession | YP_001431932 |
|---|
| Protein GI | 156741803 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2957] Peptidylarginine deiminase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAT CCCAACCGAC GCCAGCCCAA CTCGGATACC GGATGCCGGC TGAGTGGGCG
CCACACCAAG CGACCTGGCT CTCCTGGCCC CACAACGAGG AGTCGTGGCC CGGCAAACTG
CACATCGTCC TGCCGATCTA TGCGCGCATG GTCGCTGCGC TGGCGCGCTC CGAAACCGTT
CACATCAACG TCAACGACGA AGCAATGGAA GAAGAAGCGT GTCGATTACT GCACAGCGTC
GGCGCCGAAG GCGACATTCA CTTTCATCAT TTTCCCACCA ACGATGCCTG GTGCCGTGAC
CACGGCGCGA TCTTCGTTGT GCGCGATGGC GACGATCCCC TGGCAGCGAT CAGGTGGGAG
TACAACGCCT GGGGTGGCAA GTACCCGCCC TTCGATCTGG ACCGGCAGAT TCCCCGGCGC
ATGGCGGAGG CGCTGGGGGC GCCCTGCTTC GATGGCGGCA TGGTGTTGGA AGGCGGCTCG
ATCGATGTCA ATGGCGAAGG ACTGTTGCTC ACGACCGAGG CTTGCCTGCT CAACCCCAAT
CGCAATCCGC ATCTCACCCG CGAGCAGATC GAGCAGCGAT TGTGCGATTA TCTGGGTGTC
TCAACGGTGC TCTGGCTTGG CGATGGGATC GTAGGCGACG ACACCGATGG GCACGTTGAC
GACCTGACCC GCTTTGTCGC GCCCGACACC GTTGTGACTG CGGTGGAAAG CGATCCGTCG
GATGAGAATT ACGACGCGCT CCAGGAAAAT CTCCGTCGTC TGCGGCGCAT GACCGATCAC
CGCGGCGGGG CGCTGCGGAT CGTCGCACTG CCGATGCCAC CTGCAATTGT GTATGAAGGG
CGGCGCCTGC CCGCTTCCTA CGCGAACTTT TACATTGCCA ATCGTGTTGT GCTGCTCCCC
ACGTTCAACC ACCCGAACGA CGACCGCGCA GCAGCGATCC TGGCGGAACT TTTTCCGACA
CGCGAGATTG TGGGGATTGA CTGCACCGAT ATGGTGTGGG GGCTTGGCGC CTGGCACTGC
CTGACGCAGC AGGTTCCGGC GGTGTAA
|
|---|
| Protein sequence | MTTSQPTPAQ LGYRMPAEWA PHQATWLSWP HNEESWPGKL HIVLPIYARM VAALARSETV
HINVNDEAME EEACRLLHSV GAEGDIHFHH FPTNDAWCRD HGAIFVVRDG DDPLAAIRWE
YNAWGGKYPP FDLDRQIPRR MAEALGAPCF DGGMVLEGGS IDVNGEGLLL TTEACLLNPN
RNPHLTREQI EQRLCDYLGV STVLWLGDGI VGDDTDGHVD DLTRFVAPDT VVTAVESDPS
DENYDALQEN LRRLRRMTDH RGGALRIVAL PMPPAIVYEG RRLPASYANF YIANRVVLLP
TFNHPNDDRA AAILAELFPT REIVGIDCTD MVWGLGAWHC LTQQVPAV
|
|---|
| |