Gene Rcas_1821 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1821 
Symbol 
ID5539299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2330111 
End bp2330509 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content58% 
IMG OID640893959 
Producthypothetical protein 
Protein accessionYP_001431930 
Protein GI156741801 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.977434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGA AGACCGATCG GCGTCGTGCG CTGGCGATGA CCATTCCAGA GGCGCCGGTC 
TGGCGGTTGA GCCTGGAGCA GTGCTATCAC ATAATCCAGA CCGGCATCCG CACCGACGAT
GATTCCGTCG AGTTTCTCGA AGGGTTGTTG GTGACGAGCA CGCCCAAAAA TTCGTCGTAT
AACCTTGCGG CACATTTGAC ACGCAACGCG CTTACGCAGG TTGTGCCAGC GCAATGGTAT
ATTGATGCGC AGGAACCATT CACCGCTGAC GTGAGCGAGC CGGAACCGGA TGTTCTGGTC
GTCTGTGGCG AGCGCCGTAT CACGGTCACC ACCCGCAGGA CATTGCGCTG GTTGTGGAAG
TGGCAGATAC CACGCTCAAG CGGGATCGAA CCGGTATGA
 
Protein sequence
MTVKTDRRRA LAMTIPEAPV WRLSLEQCYH IIQTGIRTDD DSVEFLEGLL VTSTPKNSSY 
NLAAHLTRNA LTQVVPAQWY IDAQEPFTAD VSEPEPDVLV VCGERRITVT TRRTLRWLWK
WQIPRSSGIE PV