Gene Rcas_1805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1805 
Symbol 
ID5539283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2316660 
End bp2317208 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content61% 
IMG OID640893944 
Producthypothetical protein 
Protein accessionYP_001431915 
Protein GI156741786 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATGT CAAAACCGAT CACCGATTTG AAGTTCAACG TCGCCCAACT GTTGCGCGAG 
TACGTCGGCG CGTCACGCAG GTACGACTTT GCTGAGCCGG TGCTGCGCCT CGACGATACG
CTCGAAATGC GCGGCATGGT CGGTGAGGTG CGGTTTACCC GCACCGCCAG CGGGGTATTG
GTCGATGTGC ATGCCCGCGG AACGGTGGAG ATGGAGTGTG TCCGCTGCCT CAATCCGGCT
GTGCAGCCTA TCGAGGTGCG CTTCCGTGAT GAGTTCCATT CGCGGATCGA TGTGACGACC
GGAACGCCGC TGCCGCAACC CGACGAGGAG GACCCCTTCT ATCTCGATGA GTTGCATATG
GCGGACGTCG GCGAGATGCT GCGCGAGTAT GTGCTGCTTG AACTGCCTAT GCAGCCGCTC
TGTCGTCCCG ACTGCCGTGG TCTTTGCCCG GAGTGCGGCG CCGATCTGAA TGTCGAGCAG
TGTTCGTGCG GCAGTTCTGG CGGCGATGAA CGGTTCGCTG CGCTGCGCGC GCTTCTGAAG
CCAGAATAG
 
Protein sequence
MHMSKPITDL KFNVAQLLRE YVGASRRYDF AEPVLRLDDT LEMRGMVGEV RFTRTASGVL 
VDVHARGTVE MECVRCLNPA VQPIEVRFRD EFHSRIDVTT GTPLPQPDEE DPFYLDELHM
ADVGEMLREY VLLELPMQPL CRPDCRGLCP ECGADLNVEQ CSCGSSGGDE RFAALRALLK
PE