Gene Rcas_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1799 
Symbol 
ID5539277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2310805 
End bp2311524 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content58% 
IMG OID640893938 
Productputative esterase 
Protein accessionYP_001431909 
Protein GI156741780 
COG category[S] Function unknown 
COG ID[COG4947] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.938464 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTA CCTACCATTG CTGGGAAAGC CCGGCGCTCG GCAGACCGAT GGAACTGCTG 
GTGTTTGGTC ACGCGGGTGC GCCGGTGATC GTGTTCCCGA CATCGCGCGG TCGATTCTTC
GAGTACGAAG ACCGCGCCAT GGTTGCCACA CTGGGGCATC ATATCGAACA GGGATGGATT
CAACTTTACT GCGTGGACAG CGTGGATGCA GAAAGCTGGT ACTGCGGCTG GATCCATCCG
CGTGATCGCC TGCGCCGTCA CGATCAGTAT GAACACTACA TTCTCGATGA AGTGCTGCCG
TTTATCCACC ACCAGAATCC CAATCCCTTC ATTATGGTTC ACGGTTGTTC ATTCGGCGCA
ACCCACGCGA TGCTCTTTGG GCTGCGTCAT CCGACGCGCT TCAGCCGCGT CCTGGCGTTT
TCCGGCTTGA TGGACATTCG CTCATTCATG GATGGCTATC ACGATCAGGA GGTGTACTTC
CACAACCCGG TCGAGTTCAT CGGCGGGTTG CAGCCGGGAG AGTACGCCGA CGCTCTGCGT
CGGCTGGATA TTATCATGGC GATTGGACGC GACGACGAAC TGGCGCCGAG CAATGCCGCG
CTTTCGGAAG CACTCTGGCG CAAGGGTATC TGGCATGCGA TGCGCTGGTG GGACGGCTGG
GCGCACGACT GGCCCTACTG GCAGCAGATG ATCCGTATCT ACATCAATGG CGCGGACTGA
 
Protein sequence
MQRTYHCWES PALGRPMELL VFGHAGAPVI VFPTSRGRFF EYEDRAMVAT LGHHIEQGWI 
QLYCVDSVDA ESWYCGWIHP RDRLRRHDQY EHYILDEVLP FIHHQNPNPF IMVHGCSFGA
THAMLFGLRH PTRFSRVLAF SGLMDIRSFM DGYHDQEVYF HNPVEFIGGL QPGEYADALR
RLDIIMAIGR DDELAPSNAA LSEALWRKGI WHAMRWWDGW AHDWPYWQQM IRIYINGAD