| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1782 |
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| Symbol | |
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| ID | 5539260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2288455 |
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| End bp | 2288685 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893921 |
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| Product | AsnC family transcriptional regulator |
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| Protein accession | YP_001431892 |
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| Protein GI | 156741763 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00773049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGCCA GAGCCTATGT CCTGATCGAA GCCGAAGCTG GCCAGGTGAG CTCCGTGCTC
GCCACGTTGC GCGCCATCAA GGGCATCACG CTTGCCGATC CGGTGACCGG TCCATACGAC
ATTATCGTGA CAATCGAAGT GCCCGACCAG CGCGATATCG GTCGTCTGGT GATGAATGAA
CTGCATGGCA TTCCGGGGAT CAAGCGCACG GTAACATGCC TGGCGATCTG A
|
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| Protein sequence | MLARAYVLIE AEAGQVSSVL ATLRAIKGIT LADPVTGPYD IIVTIEVPDQ RDIGRLVMNE
LHGIPGIKRT VTCLAI
|
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| |