| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1780 |
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| Symbol | |
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| ID | 5539258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2286342 |
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| End bp | 2287703 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893919 |
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| Product | H(+)-transporting two-sector ATPase |
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| Protein accession | YP_001431890 |
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| Protein GI | 156741761 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
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| TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.223329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTGT CGCCGCGATC ATCGGTGCGC TCCTCTTATC GGCCGCGTCC TATGCCGGCT
GCGTTGCGCC TGGTGATCGG GCTGGCGATC CTGGTGACGG TCGGCACGCT GACCCTGATG
CTGCCATGGA TGGGCGCTCA ACGTCCACTC ACATGGAATG AGGCGCTCTT TACTGCGGTT
TCAGCACTCA GTGTCACCGG TCTGTCTATC ATCACTCCGG TCTCCGATCT CAGTCTTGCC
GGTCAGATCG TGCTGCTGCT GCTGATCCAG ATCGGCGGCG TCGGGTTTAT GGTCATGGCG
GTCATTGTCT TTCAGTTGCT GGGAAGACGA ATCACCCTCA CCGATCGCCT GGCGCTGACC
GACTCGATGG GATTGCTGGT GCCCGGCGCG ATTGTGCAAC TGGTGCGGCG CGTGCTGCTG
ACGGTCTTGT TGATCGAGAC GATTGGCGCT GCCTTGCTCT GGATTCACTG GCGCGACATG
CTGGGACCGG AACGCGCTCT GTTGTATGCG ATCTTTCACT CGGTCTCCGC CTTTTGCAAC
GCCGGTTTCG ACCTGTTCAG CGGGTTGCCG CAGCACCCCT ACGGCATTCC CAACGATAGC
ACCTCACTGG CGATCCTGGG GACGCTCATT TTCCTCGGCG GGTTGGGCAT CCCGGTGCTG
GCGGAATTGC TCACGTTCTG GCGGATACGC TTCTCTCTGC ATACGCGCAT CACGCTGACC
GTCGTTCTCA CGCTGGTCTC GATTGGCGCC GGCGGGCTTT TTCTGACCGA ACAACAACCC
GGTCATCCGC TGGCAAACGA GTCGCTGGAG CGCCAGATTG CGCTGGCGCT CTTTCAGTCA
ATTTCGACGC GCACTGCCGG ATTCAGCGCC TTTCAGCCGC TCGATGAGTT ATCCCCCGCC
GGTCGATTAC TGACGATTGT GCTGATGTTC ATCGGGTGTG CGCCGGCATC GATGGGAGGC
GGCATTACGA CAGGGACGTT TGCAGTGTTG ATGCTGGCAG TGGGCGCCTA TGCGCGCGGC
CTGGCATCAC CACAGATTGG CGGGCGCACC CTGGCGCCGC AGACGGTGCG TAAGGCAGCC
GCCATTCTGA CGGTGTCGCT CCTGGTGGTG CTGACGGCAA CCTGGTTGAT CCTGATCACG
CACGAGGCCT CGCTCGATGA TGCTCTGTTC GAGGTGGTAT CGGCGTTTGC GACCTGCGGC
TTGTCACTAC AATTGACCGG CGAGTTAAAC CTCTTTGGTC AACTGGTGAT CTGTGTGATG
ATGTTTTGGG GCCGGTTGGG CGCTCTGACG CTGGTTGTGG CGCTGGCGCA CCAGCGCCCG
CAACTGGTGA CATACCCGGA GGAGCAAGTG CTCATCGGGT GA
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| Protein sequence | MRLSPRSSVR SSYRPRPMPA ALRLVIGLAI LVTVGTLTLM LPWMGAQRPL TWNEALFTAV
SALSVTGLSI ITPVSDLSLA GQIVLLLLIQ IGGVGFMVMA VIVFQLLGRR ITLTDRLALT
DSMGLLVPGA IVQLVRRVLL TVLLIETIGA ALLWIHWRDM LGPERALLYA IFHSVSAFCN
AGFDLFSGLP QHPYGIPNDS TSLAILGTLI FLGGLGIPVL AELLTFWRIR FSLHTRITLT
VVLTLVSIGA GGLFLTEQQP GHPLANESLE RQIALALFQS ISTRTAGFSA FQPLDELSPA
GRLLTIVLMF IGCAPASMGG GITTGTFAVL MLAVGAYARG LASPQIGGRT LAPQTVRKAA
AILTVSLLVV LTATWLILIT HEASLDDALF EVVSAFATCG LSLQLTGELN LFGQLVICVM
MFWGRLGALT LVVALAHQRP QLVTYPEEQV LIG
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