| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1775 |
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| Symbol | |
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| ID | 5539253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2278252 |
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| End bp | 2279829 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893914 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001431885 |
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| Protein GI | 156741756 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACGT CACTCTACGC TCTACTGGAA CGACAGGCGG CTGCCCGAAA CGATCAGGTC
TATCTCTACT GGCGCGACGA GGAGATCAGT TACGCGGAGT TTACCCGAAA GGTGCGTCAG
GCGGCTCATG GACTTCGTGC GCTTGGTGTG GAGCATAGCG ACAAAGTCGC TCTATTACTC
GGCAACTGCC CCGAGTTTCT GACCATCTTC TTCGCCTGTG CAGCGCTCGG CGCCGTCGCC
GTGCCGATCA ACCCGCGCCT GAAAGCCGAA GAAGTGGGGT ACATCTTGCA AAACTCCGAC
AGCGTGGTGC TGGTCGTTGC TGACACCCTG CTGCCGATCA TCGCTCCGGC GCTCGACGGA
TGCCCGCAGT TGCGCCATAT CGTGATTGTC GGCGCCGTCC CGGAAACATC GATCACACGG
ACGCTGCATC CTTTCACCAG TCTCTCCGCT GCCGGCGATC ATCCGGTCAG CGCAGCCGTG
GGACCAGAGG ACATCGCCAG CATTATCTAT ACCTCTGGAA CGACAGGACG ACCGAAAGGA
GTCTTACTCT CGCATGGCAA CTACCTGTTC GATGTCTGGT CGTATGCGAC AGCCTGCCAG
ATCAGCGAGG CAGATCGGTT GCTGTGTATG TTGCCCCTTT TCCATGTCAA TGCGCAGGTC
GCCAGCGTTC TTTCAGCATT GCACCAGGGC GGCGCCTTGA TTCTCCTGGA AGGATTCTCA
CCGCGTGAGT TCCTGCCAGC GCTAGCGCGC TACCGCGCCA CCAGTTTCAG CGCCGTGCCG
ACGATTTACG CCATTCTCAA CAATCTGCCC GATGCCGGGC AGTACGATCT GAGCAGCCTG
CGGGTATGCA TCTGCGGCGC CGCCCCGATG CCGGTTGAGG TATTCGAGCG TTTCGAGCAG
ATATATCGGG CGTTCATTCT GGAGGGGTAT GGGTTGAGCG AGGGCACATG CGTCAGTACG
CTCAACCCAC TGGACGGTCG CCCTCGCAAG ATCGGCTCGA TTGGTGTGGC GCTTCCCGGT
CAGGAGGTTC GTATTGTGGA TGACCAGGGA CAGCCTGTGC CGCCGGGGAC CGTAGGCGAG
ATTGTCATCC GCGGTCCGAA CGTGATGCAG GGATACTACA AAAATCCCGA AGCGACTGCC
GCTGCCATTC GGGATGGATG GCTCTTCACT GGCGATCTCG GCTCGCGCGA CGCCGAGGGC
TACTTCTTCA TCGTCGGGCG CAAGAAGGAG ATGATCATCC GGGGCGGTGA GAATATCTAC
CCCAAGGAAA TCGAGGAAGT GCTCTACCGA CACCCGGCAG TGGCGGAAGC GGCCGTGGTC
GGATTACCCG ATCCAATCTG GGGCGAGCAG GTTGCTGCGT TCATCGTTGC TCATCCTGGC
ATCTCTGTGA GCGCCGAAAC GATTATTGAG CACTGCCGGG CGCACCTGGC GGATTTCAAA
TGTCCGCAGG TCGTGGAGTT CGTGGAGTCT TTCCCTAAAA CAGCAACCGG AAAGATACAG
AAGAACCGGC TGGTCGAACG GTATGCCGGT CTCTCTGCGC ACCGTTCGCC TGATGCTGAG
GCGGGACCGA AGTCATGA
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| Protein sequence | MDTSLYALLE RQAAARNDQV YLYWRDEEIS YAEFTRKVRQ AAHGLRALGV EHSDKVALLL
GNCPEFLTIF FACAALGAVA VPINPRLKAE EVGYILQNSD SVVLVVADTL LPIIAPALDG
CPQLRHIVIV GAVPETSITR TLHPFTSLSA AGDHPVSAAV GPEDIASIIY TSGTTGRPKG
VLLSHGNYLF DVWSYATACQ ISEADRLLCM LPLFHVNAQV ASVLSALHQG GALILLEGFS
PREFLPALAR YRATSFSAVP TIYAILNNLP DAGQYDLSSL RVCICGAAPM PVEVFERFEQ
IYRAFILEGY GLSEGTCVST LNPLDGRPRK IGSIGVALPG QEVRIVDDQG QPVPPGTVGE
IVIRGPNVMQ GYYKNPEATA AAIRDGWLFT GDLGSRDAEG YFFIVGRKKE MIIRGGENIY
PKEIEEVLYR HPAVAEAAVV GLPDPIWGEQ VAAFIVAHPG ISVSAETIIE HCRAHLADFK
CPQVVEFVES FPKTATGKIQ KNRLVERYAG LSAHRSPDAE AGPKS
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