Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1748 |
Symbol | |
ID | 5539226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2251573 |
End bp | 2252871 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640893887 |
Product | AAA ATPase |
Protein accession | YP_001431858 |
Protein GI | 156741729 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0606] Predicted ATPase with chaperone activity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.386005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.990458 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACCCG CACTTTCGCA GAACCCTCAA GTCGAATCTG CAACGTCGCT GCTTCCACTT CGTCCGCGAA GTATCGAGGC GACCGGGCTG ACGCTCTCGT TTATTGCCGA TCAGATGCTG CGCGCCCTCT ATCTGATCGG TGAGATGACC GGTCTGCAGC TGGTGGAATT ACTGCACCTT CCGTGGGAAA ATGTGCTTGA TCAGGCGATG GCCTATCTGC GACGCGAGCA GATGGCTGAA GTCAAGGGCA GCAGCGGCGT CGGTGAGAAA GCATATCGTT ATCAGGCGAC AGCCAAAGGT ATCACGCGCG CGAAAGAGAT CGGCGAGCGG ACGCAGTACC TGGGACCGGC GCCGGTCAAC CTGTCTGATT ACCGCAATGT GATGCATCGG CAGACGACGC AGGGATTAGT CGTAACTGAA GCGGCCATTC GTGAAGCGTT TTCGCACCTG GTGCTCAGCG ACTCAATTCT GCTCCAGTTG GGACCGGCGA TCAACTCTGG TCGTTCAATC TTCCTCTTTG GGCATGCCGG GAACGGCAAG ACCTCGATTG CTGAAGCGAC GGCACGGCTG CTTTCAGACT CGATTGCCAT TCCGCACGCC ATCATCGTCG ATGGACAGAT TATTCGCATC TTCGATCCTA TTCACCACGA GCGCCGTCCA CTGGCGGAAG GGCAGGAATA CGCCTACGAT CAACGCTGGG TGCTGTCGCG GCGTCCGGTT GTCATTGCCG GTGGTGAATT GAATATGGGG TCGCTCGACC TTGAATATGA TGAGTACAGC AAATATTACG AAGCGCCGCT TCAGTTGAAA GCCAACGGCG GATTATTCCT GATCGACGAC TTTGGCCGGC AGCAGATGCG CCCGCGCGAT CTGCTCAACC GCTGGATCGT CCCACTCGAG AAACGGGTAG ACTACCTGAC CCTGCATACC GGCAAGAAGA TTGAAGTGCC ATTCGATCAG TTAATCATCT TCTCGACCAA TATCGAGCCA AAGCAACTGG TCGATGAAGC CTTTTTGCGG CGCATCCGCT ACAAAATCGA AATCGGCAAC CCGACGCCGG CAGAGTATCG CGAGATTATG CGCCGCGTCT GCAAGGCGAA GAACGTGCCA TACAGCGACG ACGGGCTGCG CTATTTGTTG GAGGTGGAGT ACCCGCGCCG CAAACTGGAA CTGCGCGCCG TCCATCCGCG CGATCTGATC GATCAGGTAA TCGATTACGC GCGCTTTCTG GGGGTGCCGC CGACTATGTC GCGGGAACTG CTGGCGGCAG CGTGCAAGTC GTACTTTGTC GAGATGTGA
|
Protein sequence | MQPALSQNPQ VESATSLLPL RPRSIEATGL TLSFIADQML RALYLIGEMT GLQLVELLHL PWENVLDQAM AYLRREQMAE VKGSSGVGEK AYRYQATAKG ITRAKEIGER TQYLGPAPVN LSDYRNVMHR QTTQGLVVTE AAIREAFSHL VLSDSILLQL GPAINSGRSI FLFGHAGNGK TSIAEATARL LSDSIAIPHA IIVDGQIIRI FDPIHHERRP LAEGQEYAYD QRWVLSRRPV VIAGGELNMG SLDLEYDEYS KYYEAPLQLK ANGGLFLIDD FGRQQMRPRD LLNRWIVPLE KRVDYLTLHT GKKIEVPFDQ LIIFSTNIEP KQLVDEAFLR RIRYKIEIGN PTPAEYREIM RRVCKAKNVP YSDDGLRYLL EVEYPRRKLE LRAVHPRDLI DQVIDYARFL GVPPTMSREL LAAACKSYFV EM
|
| |