| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1724 |
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| Symbol | |
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| ID | 5539202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2219309 |
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| End bp | 2220238 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893863 |
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| Product | periplasmic solute binding protein |
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| Protein accession | YP_001431834 |
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| Protein GI | 156741705 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.147475 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACT TCGGGTTGCT GCTGCTGATG CTGGTACTGG TTGCGTGTGC ATCGCCCGGT
GCGCCCGACG GCAATCTGTC CGACCGTCCC ATCCGCGTGG TGACAACCAC GGGCATAGTT
GGCGATCTGG TGCAAAACAT CGGCGGCGAG CGCGTCAGCG TGATCAGCCT GATGGGTCCG
GGGGTTGATC CACACGTGTA CAAAGCGAGC GCCAGGGATG TGATCCGACT CCAGGATGCG
GACATTATCT TCTATAACGG GCTGCACCTC GAAGCGGCAA TGGGCGACGT GCTCGAACGC
ATGCAGGGTC GGGTCAGAAC AGTCGCGGTG ACGGCCGGCA TCCCGCGCGA ATCGCTGCTA
CCGTCGGACA AGTATGAAAA CCTGTACGAT CCGCATATCT GGTTCGATGT GACGCTGTGG
AAGCGAGCGG CGGAGCATGT GCGCGACGCG CTGATCGATC TCGATCCTTC CAATGCATCG
GTCTATCGCG CGAATGCTGA CAATTATATT CGTCAACTCG ATGCGTTGCA CACCTACGCG
CTGGAGCAGT CGGCGACCAT TCCCGCCGGG CAACGGGTGC TGATCACTGC GCACGATGCC
TTTCGCTACT TTGGTCGTGC CTACGGGTTC GAGGTTCGTG GATTGCAGGG CATCAGCACG
GCAACCGAAG CAGGCGCTGC TGATGTACAG GCGCTGGCTG AATTTATTGC AACGCGCCAC
ATTCCGGCAA TCTTCGTCGA GACCTCCGTG CCACAACGCA CCATCGAGGC GGTGCAGGCA
GCAGTGCAGG AGCGAGGTTT TACGGTAGCG ATTGGGGGCG AACTCTTCTC CGACGCCCTG
GGGACACCCG GAACGTCGGA GGGAACCTAC ATCGGCATGG TGCGCCACAA TATCGACACG
ATTGTACGCG CATTGCGTGG CGCCGCATGA
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| Protein sequence | MKHFGLLLLM LVLVACASPG APDGNLSDRP IRVVTTTGIV GDLVQNIGGE RVSVISLMGP
GVDPHVYKAS ARDVIRLQDA DIIFYNGLHL EAAMGDVLER MQGRVRTVAV TAGIPRESLL
PSDKYENLYD PHIWFDVTLW KRAAEHVRDA LIDLDPSNAS VYRANADNYI RQLDALHTYA
LEQSATIPAG QRVLITAHDA FRYFGRAYGF EVRGLQGIST ATEAGAADVQ ALAEFIATRH
IPAIFVETSV PQRTIEAVQA AVQERGFTVA IGGELFSDAL GTPGTSEGTY IGMVRHNIDT
IVRALRGAA
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