Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1703 |
Symbol | |
ID | 5539181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 2196725 |
End bp | 2197279 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640893842 |
Product | hypothetical protein |
Protein accession | YP_001431813 |
Protein GI | 156741684 |
COG category | [S] Function unknown |
COG ID | [COG4636] Uncharacterized protein conserved in cyanobacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.19244 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATCG AAGCAGCCGC GATAACCGCC GAAGACCTGG CGCAGATGTC GTTTGGGGAG CAGCGTGTCG AACTCGTGCG CGGGGAGGTG ATCACGATGG CGCCAGCCGG TGCGGAGCAC GGCGAAATTG CTGGTTTTGT GTTTGGCATC CTGTTTAGTT TTGTTCGCGC GCATAACCTC GGTTCGCTGT ACGCTGCTGA AACCGGGTTC ATTCTGGCGC GCAACCCGGA TACGGTGCGC GCGCCGGATG TGGCGTTCGT CGCGTCCGAA CGGGCCGCGC AGCAGCGGGG ACGCTCCGGG TTCTTCGAGG GTCCGCCCGA TCTGGCGGTT GAGGTGGTTT CGCCGAGCGA CACCGCAGAG GATGTCGAAG CGAAGGTGCT CGATTATCTG GAAGCAGGCG CGAGAATGGT CTGGATCGTG CGCCCGCGAA CGCGCACGGT GACGGTGTAT CACTCGCTGC GCGCGGTGCA GGTGCTGCGC CCCGGCGATC TGCTCGACGG CGGCGACGTG CTGCCGGGAT TTGCAGTGCC GGTTGCGGCG TTGTTTGGCG GTTGA
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Protein sequence | MSIEAAAITA EDLAQMSFGE QRVELVRGEV ITMAPAGAEH GEIAGFVFGI LFSFVRAHNL GSLYAAETGF ILARNPDTVR APDVAFVASE RAAQQRGRSG FFEGPPDLAV EVVSPSDTAE DVEAKVLDYL EAGARMVWIV RPRTRTVTVY HSLRAVQVLR PGDLLDGGDV LPGFAVPVAA LFGG
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