Gene Rcas_1703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1703 
Symbol 
ID5539181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp2196725 
End bp2197279 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content64% 
IMG OID640893842 
Producthypothetical protein 
Protein accessionYP_001431813 
Protein GI156741684 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.19244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATCG AAGCAGCCGC GATAACCGCC GAAGACCTGG CGCAGATGTC GTTTGGGGAG 
CAGCGTGTCG AACTCGTGCG CGGGGAGGTG ATCACGATGG CGCCAGCCGG TGCGGAGCAC
GGCGAAATTG CTGGTTTTGT GTTTGGCATC CTGTTTAGTT TTGTTCGCGC GCATAACCTC
GGTTCGCTGT ACGCTGCTGA AACCGGGTTC ATTCTGGCGC GCAACCCGGA TACGGTGCGC
GCGCCGGATG TGGCGTTCGT CGCGTCCGAA CGGGCCGCGC AGCAGCGGGG ACGCTCCGGG
TTCTTCGAGG GTCCGCCCGA TCTGGCGGTT GAGGTGGTTT CGCCGAGCGA CACCGCAGAG
GATGTCGAAG CGAAGGTGCT CGATTATCTG GAAGCAGGCG CGAGAATGGT CTGGATCGTG
CGCCCGCGAA CGCGCACGGT GACGGTGTAT CACTCGCTGC GCGCGGTGCA GGTGCTGCGC
CCCGGCGATC TGCTCGACGG CGGCGACGTG CTGCCGGGAT TTGCAGTGCC GGTTGCGGCG
TTGTTTGGCG GTTGA
 
Protein sequence
MSIEAAAITA EDLAQMSFGE QRVELVRGEV ITMAPAGAEH GEIAGFVFGI LFSFVRAHNL 
GSLYAAETGF ILARNPDTVR APDVAFVASE RAAQQRGRSG FFEGPPDLAV EVVSPSDTAE
DVEAKVLDYL EAGARMVWIV RPRTRTVTVY HSLRAVQVLR PGDLLDGGDV LPGFAVPVAA
LFGG