| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1691 |
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| Symbol | |
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| ID | 5539167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2181774 |
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| End bp | 2182442 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893828 |
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| Product | helix-hairpin-helix repeat-containing competence protein ComEA |
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| Protein accession | YP_001431801 |
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| Protein GI | 156741672 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.176877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000719685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | GTGGAGTTGT TCAGTGAATT GATGCAGCGC AAGGCGCTGG TTGCAGCGGC GTTGCTCTTC
GCCTTGGGAG CGGGCATCCT CGGGCAAACG GCGTTGGAGC GTCTGACTCC GCAGGGAGTG
CAATCAGGAC CCAACGAACC GGCGGCGGAC GTTAGCGACG ATACGTTTGT TGAAGACAGT
CTTGACCAGG ATGAGTCGGT GCGTCCAGCA ACGCCGACAC GAGTTGCATG TATCGTCGCT
TACATAAGCG GCGCGGTTCG TGCGCCGGAT GTCTATCAGT TGCCGGTTGG AGCAAGGGTA
AAAGACCTGG TGTTGGCGGC GGGCGGGTTG AGCGACGATG CCGACATCGA GCGGATCAAC
CTGGCAGCCC CGATTGCTGA TGGTCAGCAC GTGCGGGTGC CGTGGATCGG CGATGGAGCG
ACGATGGCAG CAACAGCGCC GACGGAGAGT CCAGCGAGTG GCGAGTCGAG CGGATTAATC
GATCTGAACC GTGCCACGGC AGCAGAACTT GATGCACTAC CGGGTATCGG TAATGTGCTG
GCGAACCGGA TCGTCGAATG GCGCGAACGT GAGGGACCGT TTCAATCTGT GGATGATCTT
GGCAAAGTGG AAGGTATCGG TCCCGCATTG CTGGCAAAAC TGAAGCCGCT CGTGACCGTT
GCCCCATGA
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| Protein sequence | MELFSELMQR KALVAAALLF ALGAGILGQT ALERLTPQGV QSGPNEPAAD VSDDTFVEDS
LDQDESVRPA TPTRVACIVA YISGAVRAPD VYQLPVGARV KDLVLAAGGL SDDADIERIN
LAAPIADGQH VRVPWIGDGA TMAATAPTES PASGESSGLI DLNRATAAEL DALPGIGNVL
ANRIVEWRER EGPFQSVDDL GKVEGIGPAL LAKLKPLVTV AP
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