| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1686 |
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| Symbol | |
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| ID | 5539162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 2170008 |
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| End bp | 2172488 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893823 |
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| Product | von Willebrand factor type A |
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| Protein accession | YP_001431796 |
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| Protein GI | 156741667 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000433208 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGAC GTTTGCTTCA TCACAGGACA GAAGGGCAGA ATATCGTCCT GCTCGCCGGC
ATTCTGGCAT TGCTGGTCGG CATGGCGGCC CTGGCTGTCG ACCTCGGCGT CACCTACGCC
GAGCAGCGGA ACATCGTGCG CGGCACGAAC GCGGCGTCGC TGGCGGGCAT GAATCGCCTG
ATCAGCGGCG GTCGCGATGC TGATGTCGCC CTTGCGATCT ATGAATCGCT TCGCTCGAAC
GGCATCCAGG TCACCGTGCC GGGCGAGTCG CCGCAACCCG GCGACCGCGC GTTCGAGGCG
CTCTACCTGG GAAGCGATGG CGCGCCGATC CCCGGCGCGT GCAGTCGCGT CGGCGCCTGC
GGCTCGCAAC GTCCGCAGGG GGTGAAGTAT ATTCAGATCG ACCTCAAGGG CAATGTCGAT
ACCTACTTTG CGCGCCTCTT CGGTCAGAGC ACCCTGCCGG TCGGCGCTAC GGCATACGCC
AGCGTCGGCG CCTGCGCCAC CGGATACTAC CCCATCGGTG TGCGCACGAC AGTCGGCGGG
CAGCCGATGT TCGATGAGTA TGGGTTCGCC AATTACGACG GCTTCTATGA AGACGAGACC
TATGCTCAAT TGCGCTATCA GCGCCTCTAT CTGCGCACCG AAAACAACCC GAATGGCGGG
TTTAGCCTGC TGCGCTGGCG CAACGACATC CCTGCCGGCA ATGCCAATGC GCTTGCGGAG
ATGCTGACCG GCGACGGCAC CTATAGCCGG GGGTACGCCG AAGCGCCCTG GCCCGAAATC
GCCAGCGGAA CGGACGGTCC GACCCGCCCT GACTCCTATC CGTTCGAGCC GAATACGATC
AACACGGCGG ACTGGGTGTA TGGTAATGTC TTCGGCGGCA ATCCCTTCAA TGCGAATGTG
ATCAATCAAC TCGATACGCT GAAGCGCAAT CGCACCCTGA TGACTCTGCC GATGTATCGC
TTCGATAACG GCAGTCTTTC CAACCCGACG TACTACCTCG AGCGCTTTGG CGCCTTCCTG
CTGGTTGATT ACGGTGTGGA TACCGATGGG CGGGCGCCCG ACGGTCCTTG GATGGAACTG
GCTTACGTGC GCGAAGGCGG GCAGTGCGCC AACCTCGTCA CCGGTGCGCC GCCAACCAAC
AACTTCACCG TCGGCGGCAG CGTGACCTAT ACGCCACGCT ATCAGACCTA CCCGGACCTC
AATCGCCCGG TGCAGTTCCT ACTCATCCTC GACGTGTCCG GTTCGATGTC GTGGACGTTC
GATGGGCGCG GCGTGCAGAA TGGGCAAACC GTCTTCTGCA CCAACCCGTC TCAAGGGTGC
GTCTCGGTGC AAACGGCATG GCCCAACGCG CAGGAACGCC GGATCTATAC TGCGAAGCAG
GTGCTGCGCT CGTTCGTGGC ACAGATCGAT CAGGATCGGC AGAGCGGTCT CCGACCGTAT
GATACCGTGC GCCTCGTGAC CTTCAGCGGA CGCCTGGGCA GCTTTGTCAA CAGCAGCGGC
GCCGTCGGCG ACAATAATCG CGCGTTGAAC GACCTGACCG AGGTGCTGCC TGCCGGTTGG
ACGAATGACC GCGCGACATT GGAAGCGGCG ATCAATAGTG CCGGTATGGT GGACGGCGAT
CCGTATATGA CGGCAGGCGC AACGCCCAGC GCCGTCGCCT TTGCCCGCGC CAGCCAGGTG
TTCGCCAACG CTCCCGAACG CGCGCCCAAC GGGATGAAGT ATCGCCGCGT GGTGATTTTC
GTGACCGACG GTGTGGCGAA TGTGTTGCGC AATGGTATGC AGAATAACTA CGGTGAGGGG
TGCCAGTTGG GCGCTGAGAA CGTCGGTTGC CAGATGGGCG ATCCGCTGCC GGACGGCAGC
CTGCGACCGC TCAATGCGAT GGTCGCAGAG GCGCAGGCGC TCAAGGAGGC GTATATCCGC
CCCAGCGACG GTTCGGTCTA TGTGGTGGCG CTGAGCGGCA CATTCGAGGC GACCGGTCTG
AACCTCGTCG CCAGCCAGCC GGACTATGTC AAGCGCGCCG ACCGGTCCGA GGAGTTGCAG
CAGATTTTCG ACGACATCCA GGTTTCGGCG ATCCAGGGCG ATTGTACGCC ATCCCAGGGT
GAACTGCGCG ACTCGATGGC GCCCTCCGAG GTGCCGACCG ACCTGCGACC GGAATTGACC
GATCGGATCG TTGGACAGGT GACGCTCACC GATGCCAATA ACAATGTGCG CGAGGCATGG
ATTACGGCCG ATCCGATCAC GCGCAAACTG TCGTATGCGT TCACGAACGT TCCGCCGGGC
CAGTATACGC TGCGCGCCTG GCTCGGCTAT CGCGCGCCGC AGGATGGTAT CTCGCGCGAT
AAGTACGAAC TGCTGGTGCG CGGACCGGAT GTGACGACCG AAATCACGGT GCAGGTCAGC
GCCGGTCGCA GTCTCGGCGG CGTCATCGGC GTGCCGATCT CGCTCGACCT GAACGACAGC
GTCTGCCCGG CATTGTCGTA A
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| Protein sequence | MKRRLLHHRT EGQNIVLLAG ILALLVGMAA LAVDLGVTYA EQRNIVRGTN AASLAGMNRL
ISGGRDADVA LAIYESLRSN GIQVTVPGES PQPGDRAFEA LYLGSDGAPI PGACSRVGAC
GSQRPQGVKY IQIDLKGNVD TYFARLFGQS TLPVGATAYA SVGACATGYY PIGVRTTVGG
QPMFDEYGFA NYDGFYEDET YAQLRYQRLY LRTENNPNGG FSLLRWRNDI PAGNANALAE
MLTGDGTYSR GYAEAPWPEI ASGTDGPTRP DSYPFEPNTI NTADWVYGNV FGGNPFNANV
INQLDTLKRN RTLMTLPMYR FDNGSLSNPT YYLERFGAFL LVDYGVDTDG RAPDGPWMEL
AYVREGGQCA NLVTGAPPTN NFTVGGSVTY TPRYQTYPDL NRPVQFLLIL DVSGSMSWTF
DGRGVQNGQT VFCTNPSQGC VSVQTAWPNA QERRIYTAKQ VLRSFVAQID QDRQSGLRPY
DTVRLVTFSG RLGSFVNSSG AVGDNNRALN DLTEVLPAGW TNDRATLEAA INSAGMVDGD
PYMTAGATPS AVAFARASQV FANAPERAPN GMKYRRVVIF VTDGVANVLR NGMQNNYGEG
CQLGAENVGC QMGDPLPDGS LRPLNAMVAE AQALKEAYIR PSDGSVYVVA LSGTFEATGL
NLVASQPDYV KRADRSEELQ QIFDDIQVSA IQGDCTPSQG ELRDSMAPSE VPTDLRPELT
DRIVGQVTLT DANNNVREAW ITADPITRKL SYAFTNVPPG QYTLRAWLGY RAPQDGISRD
KYELLVRGPD VTTEITVQVS AGRSLGGVIG VPISLDLNDS VCPALS
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